Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TIMD4Q96H15 SDHAP2-201ENST00000455183 2001 ntBASIC15.27■□□□□ 0.04
TIMD4Q96H15 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
TIMD4Q96H15 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC15.27■□□□□ 0.04
TIMD4Q96H15 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.27■□□□□ 0.04
TIMD4Q96H15 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.27■□□□□ 0.04
TIMD4Q96H15 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TIMD4Q96H15 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TIMD4Q96H15 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.27■□□□□ 0.04
TIMD4Q96H15 TSPY12P-201ENST00000421279 868 ntBASIC15.27■□□□□ 0.04
TIMD4Q96H15 AP002383.4-201ENST00000442518 975 ntBASIC15.27■□□□□ 0.04
TIMD4Q96H15 AC104819.1-201ENST00000504587 486 ntBASIC15.27■□□□□ 0.04
TIMD4Q96H15 AP000867.3-201ENST00000524675 377 ntBASIC15.27■□□□□ 0.04
TIMD4Q96H15 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.27■□□□□ 0.04
TIMD4Q96H15 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.27■□□□□ 0.04
TIMD4Q96H15 AC011840.4-201ENST00000578471 627 ntBASIC15.27■□□□□ 0.04
TIMD4Q96H15 LINC01711-201ENST00000598340 967 ntBASIC15.27■□□□□ 0.04
TIMD4Q96H15 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.27■□□□□ 0.04
TIMD4Q96H15 AL592071.1-201ENST00000611956 408 ntBASIC15.27■□□□□ 0.04
TIMD4Q96H15 AC124864.1-201ENST00000623408 392 ntBASIC15.27■□□□□ 0.04
TIMD4Q96H15 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TIMD4Q96H15 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TIMD4Q96H15 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC15.27■□□□□ 0.03
TIMD4Q96H15 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TIMD4Q96H15 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TIMD4Q96H15 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TIMD4Q96H15 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TIMD4Q96H15 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TIMD4Q96H15 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC15.27■□□□□ 0.03
TIMD4Q96H15 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TIMD4Q96H15 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TIMD4Q96H15 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TIMD4Q96H15 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TIMD4Q96H15 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TIMD4Q96H15 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TIMD4Q96H15 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.26■□□□□ 0.03
TIMD4Q96H15 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TIMD4Q96H15 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.26■□□□□ 0.03
TIMD4Q96H15 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TIMD4Q96H15 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TIMD4Q96H15 AL450487.1-201ENST00000426799 995 ntBASIC15.26■□□□□ 0.03
TIMD4Q96H15 TOB2P1-201ENST00000469761 992 ntBASIC15.26■□□□□ 0.03
TIMD4Q96H15 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.26■□□□□ 0.03
TIMD4Q96H15 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.26■□□□□ 0.03
TIMD4Q96H15 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.26■□□□□ 0.03
TIMD4Q96H15 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TIMD4Q96H15 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TIMD4Q96H15 AC004263.2-201ENST00000617183 678 ntBASIC15.26■□□□□ 0.03
TIMD4Q96H15 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.26■□□□□ 0.03
TIMD4Q96H15 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TIMD4Q96H15 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TIMD4Q96H15 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TIMD4Q96H15 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.26■□□□□ 0.03
TIMD4Q96H15 AL499627.1-201ENST00000569373 2188 ntBASIC15.26■□□□□ 0.03
TIMD4Q96H15 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TIMD4Q96H15 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TIMD4Q96H15 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TIMD4Q96H15 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TIMD4Q96H15 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TIMD4Q96H15 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TIMD4Q96H15 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TIMD4Q96H15 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
TIMD4Q96H15 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TIMD4Q96H15 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TIMD4Q96H15 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TIMD4Q96H15 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TIMD4Q96H15 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC15.25■□□□□ 0.03
TIMD4Q96H15 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TIMD4Q96H15 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
TIMD4Q96H15 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TIMD4Q96H15 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TIMD4Q96H15 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TIMD4Q96H15 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TIMD4Q96H15 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TIMD4Q96H15 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TIMD4Q96H15 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TIMD4Q96H15 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.25■□□□□ 0.03
TIMD4Q96H15 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.25■□□□□ 0.03
TIMD4Q96H15 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.25■□□□□ 0.03
TIMD4Q96H15 TPSP2-201ENST00000561760 610 ntBASIC15.25■□□□□ 0.03
TIMD4Q96H15 AC012615.1-201ENST00000565797 1299 ntBASIC15.25■□□□□ 0.03
TIMD4Q96H15 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TIMD4Q96H15 MIR3180-1-201ENST00000580374 94 ntBASIC15.25■□□□□ 0.03
TIMD4Q96H15 MIR3180-3-201ENST00000584616 94 ntBASIC15.25■□□□□ 0.03
TIMD4Q96H15 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TIMD4Q96H15 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TIMD4Q96H15 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.25■□□□□ 0.03
TIMD4Q96H15 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.25■□□□□ 0.03
TIMD4Q96H15 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.25■□□□□ 0.03
TIMD4Q96H15 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TIMD4Q96H15 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TIMD4Q96H15 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TIMD4Q96H15 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TIMD4Q96H15 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC15.24■□□□□ 0.03
TIMD4Q96H15 GMCL1P1-201ENST00000463439 1581 ntBASIC15.24■□□□□ 0.03
TIMD4Q96H15 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TIMD4Q96H15 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TIMD4Q96H15 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TIMD4Q96H15 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TIMD4Q96H15 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms