Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CTHRC1Q96CG8 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.85■□□□□ 0.29
CTHRC1Q96CG8 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTHRC1Q96CG8 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTHRC1Q96CG8 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTHRC1Q96CG8 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
CTHRC1Q96CG8 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.84■□□□□ 0.29
CTHRC1Q96CG8 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTHRC1Q96CG8 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CTHRC1Q96CG8 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTHRC1Q96CG8 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.84■□□□□ 0.29
CTHRC1Q96CG8 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTHRC1Q96CG8 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CTHRC1Q96CG8 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTHRC1Q96CG8 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CTHRC1Q96CG8 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.84■□□□□ 0.29
CTHRC1Q96CG8 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTHRC1Q96CG8 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.84■□□□□ 0.29
CTHRC1Q96CG8 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.84■□□□□ 0.29
CTHRC1Q96CG8 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.84■□□□□ 0.29
CTHRC1Q96CG8 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CTHRC1Q96CG8 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.84■□□□□ 0.29
CTHRC1Q96CG8 FAM86EP-206ENST00000510506 987 ntBASIC16.84■□□□□ 0.29
CTHRC1Q96CG8 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.84■□□□□ 0.29
CTHRC1Q96CG8 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CTHRC1Q96CG8 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTHRC1Q96CG8 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.84■□□□□ 0.29
CTHRC1Q96CG8 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.84■□□□□ 0.29
CTHRC1Q96CG8 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CTHRC1Q96CG8 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTHRC1Q96CG8 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTHRC1Q96CG8 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.84■□□□□ 0.29
CTHRC1Q96CG8 NOC2LP2-201ENST00000407594 1944 ntBASIC16.84■□□□□ 0.29
CTHRC1Q96CG8 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTHRC1Q96CG8 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CTHRC1Q96CG8 AC008764.6-201ENST00000595909 2069 ntBASIC16.84■□□□□ 0.29
CTHRC1Q96CG8 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTHRC1Q96CG8 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CTHRC1Q96CG8 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CTHRC1Q96CG8 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CTHRC1Q96CG8 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTHRC1Q96CG8 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTHRC1Q96CG8 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTHRC1Q96CG8 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.83■□□□□ 0.28
CTHRC1Q96CG8 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTHRC1Q96CG8 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.83■□□□□ 0.28
CTHRC1Q96CG8 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.83■□□□□ 0.28
CTHRC1Q96CG8 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.83■□□□□ 0.28
CTHRC1Q96CG8 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTHRC1Q96CG8 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTHRC1Q96CG8 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTHRC1Q96CG8 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CTHRC1Q96CG8 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.83■□□□□ 0.28
CTHRC1Q96CG8 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.83■□□□□ 0.28
CTHRC1Q96CG8 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CTHRC1Q96CG8 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CTHRC1Q96CG8 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.83■□□□□ 0.28
CTHRC1Q96CG8 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.83■□□□□ 0.28
CTHRC1Q96CG8 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.83■□□□□ 0.28
CTHRC1Q96CG8 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.83■□□□□ 0.28
CTHRC1Q96CG8 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.83■□□□□ 0.28
CTHRC1Q96CG8 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CTHRC1Q96CG8 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.83■□□□□ 0.28
CTHRC1Q96CG8 KRT18P55-202ENST00000578578 1546 ntBASIC16.83■□□□□ 0.28
CTHRC1Q96CG8 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTHRC1Q96CG8 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CTHRC1Q96CG8 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CTHRC1Q96CG8 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTHRC1Q96CG8 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.83■□□□□ 0.28
CTHRC1Q96CG8 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.83■□□□□ 0.28
CTHRC1Q96CG8 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTHRC1Q96CG8 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.82■□□□□ 0.28
CTHRC1Q96CG8 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTHRC1Q96CG8 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CTHRC1Q96CG8 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTHRC1Q96CG8 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTHRC1Q96CG8 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.82■□□□□ 0.28
CTHRC1Q96CG8 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CTHRC1Q96CG8 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CTHRC1Q96CG8 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CTHRC1Q96CG8 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CTHRC1Q96CG8 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CTHRC1Q96CG8 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTHRC1Q96CG8 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
CTHRC1Q96CG8 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTHRC1Q96CG8 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.82■□□□□ 0.28
CTHRC1Q96CG8 Z83836.1-201ENST00000624605 1642 ntBASIC16.82■□□□□ 0.28
CTHRC1Q96CG8 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTHRC1Q96CG8 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTHRC1Q96CG8 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.82■□□□□ 0.28
CTHRC1Q96CG8 AC005332.1-201ENST00000577698 1310 ntBASIC16.82■□□□□ 0.28
CTHRC1Q96CG8 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTHRC1Q96CG8 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTHRC1Q96CG8 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTHRC1Q96CG8 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.82■□□□□ 0.28
CTHRC1Q96CG8 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.82■□□□□ 0.28
CTHRC1Q96CG8 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.82■□□□□ 0.28
CTHRC1Q96CG8 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.82■□□□□ 0.28
CTHRC1Q96CG8 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.82■□□□□ 0.28
CTHRC1Q96CG8 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms