Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTP4A1Q93096 UNC93B2-201ENST00000285383 730 ntBASIC16.36■□□□□ 0.21
PTP4A1Q93096 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PTP4A1Q93096 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTP4A1Q93096 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PTP4A1Q93096 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.36■□□□□ 0.21
PTP4A1Q93096 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.36■□□□□ 0.21
PTP4A1Q93096 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTP4A1Q93096 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.36■□□□□ 0.21
PTP4A1Q93096 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTP4A1Q93096 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTP4A1Q93096 HOXB1-202ENST00000577092 1414 ntBASIC16.36■□□□□ 0.21
PTP4A1Q93096 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PTP4A1Q93096 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PTP4A1Q93096 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.35■□□□□ 0.21
PTP4A1Q93096 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTP4A1Q93096 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PTP4A1Q93096 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PTP4A1Q93096 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTP4A1Q93096 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTP4A1Q93096 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.35■□□□□ 0.21
PTP4A1Q93096 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.35■□□□□ 0.21
PTP4A1Q93096 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTP4A1Q93096 LINC01126-201ENST00000623515 1646 ntBASIC16.35■□□□□ 0.21
PTP4A1Q93096 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTP4A1Q93096 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PTP4A1Q93096 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTP4A1Q93096 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTP4A1Q93096 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PTP4A1Q93096 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.35■□□□□ 0.21
PTP4A1Q93096 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.35■□□□□ 0.21
PTP4A1Q93096 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTP4A1Q93096 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.35■□□□□ 0.21
PTP4A1Q93096 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTP4A1Q93096 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.35■□□□□ 0.21
PTP4A1Q93096 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTP4A1Q93096 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.35■□□□□ 0.21
PTP4A1Q93096 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTP4A1Q93096 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTP4A1Q93096 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PTP4A1Q93096 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PTP4A1Q93096 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.35■□□□□ 0.21
PTP4A1Q93096 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTP4A1Q93096 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PTP4A1Q93096 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
PTP4A1Q93096 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PTP4A1Q93096 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTP4A1Q93096 AC093010.1-201ENST00000473625 1624 ntBASIC16.34■□□□□ 0.21
PTP4A1Q93096 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTP4A1Q93096 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PTP4A1Q93096 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTP4A1Q93096 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PTP4A1Q93096 PP12613-201ENST00000424958 2230 ntBASIC16.34■□□□□ 0.21
PTP4A1Q93096 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTP4A1Q93096 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTP4A1Q93096 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.34■□□□□ 0.21
PTP4A1Q93096 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTP4A1Q93096 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
PTP4A1Q93096 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.34■□□□□ 0.21
PTP4A1Q93096 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.34■□□□□ 0.21
PTP4A1Q93096 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTP4A1Q93096 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTP4A1Q93096 CRYGFP-201ENST00000418459 633 ntBASIC16.34■□□□□ 0.21
PTP4A1Q93096 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
PTP4A1Q93096 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PTP4A1Q93096 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PTP4A1Q93096 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.34■□□□□ 0.21
PTP4A1Q93096 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.34■□□□□ 0.21
PTP4A1Q93096 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTP4A1Q93096 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTP4A1Q93096 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PTP4A1Q93096 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTP4A1Q93096 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTP4A1Q93096 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTP4A1Q93096 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.34■□□□□ 0.21
PTP4A1Q93096 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PTP4A1Q93096 KRT18P55-202ENST00000578578 1546 ntBASIC16.34■□□□□ 0.21
PTP4A1Q93096 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTP4A1Q93096 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTP4A1Q93096 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.34■□□□□ 0.21
PTP4A1Q93096 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PTP4A1Q93096 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PTP4A1Q93096 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.33■□□□□ 0.21
PTP4A1Q93096 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.33■□□□□ 0.21
PTP4A1Q93096 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PTP4A1Q93096 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PTP4A1Q93096 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PTP4A1Q93096 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
PTP4A1Q93096 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.33■□□□□ 0.2
PTP4A1Q93096 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTP4A1Q93096 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.33■□□□□ 0.2
PTP4A1Q93096 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTP4A1Q93096 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTP4A1Q93096 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
PTP4A1Q93096 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.33■□□□□ 0.2
PTP4A1Q93096 RBM17P1-201ENST00000453646 1190 ntBASIC16.33■□□□□ 0.2
PTP4A1Q93096 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTP4A1Q93096 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
PTP4A1Q93096 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.33■□□□□ 0.2
PTP4A1Q93096 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms