Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC31.05■■■□□ 2.56
TRIM41Q8WV44 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
TRIM41Q8WV44 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC31.05■■■□□ 2.56
TRIM41Q8WV44 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC31.05■■■□□ 2.56
TRIM41Q8WV44 MIR149-201ENST00000384879 89 ntBASIC31.05■■■□□ 2.56
TRIM41Q8WV44 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC31.05■■■□□ 2.56
TRIM41Q8WV44 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC31.05■■■□□ 2.56
TRIM41Q8WV44 AP006288.1-201ENST00000446065 395 ntBASIC31.05■■■□□ 2.56
TRIM41Q8WV44 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC31.05■■■□□ 2.56
TRIM41Q8WV44 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC31.05■■■□□ 2.56
TRIM41Q8WV44 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC31.05■■■□□ 2.56
TRIM41Q8WV44 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC31.05■■■□□ 2.56
TRIM41Q8WV44 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC31.05■■■□□ 2.56
TRIM41Q8WV44 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC31.05■■■□□ 2.56
TRIM41Q8WV44 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC31.05■■■□□ 2.56
TRIM41Q8WV44 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC31.05■■■□□ 2.56
TRIM41Q8WV44 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC31.05■■■□□ 2.56
TRIM41Q8WV44 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC31.04■■■□□ 2.56
TRIM41Q8WV44 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC31.04■■■□□ 2.56
TRIM41Q8WV44 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC31.04■■■□□ 2.56
TRIM41Q8WV44 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
TRIM41Q8WV44 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC31.04■■■□□ 2.56
TRIM41Q8WV44 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC31.04■■■□□ 2.56
TRIM41Q8WV44 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC31.04■■■□□ 2.56
TRIM41Q8WV44 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
TRIM41Q8WV44 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
TRIM41Q8WV44 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
TRIM41Q8WV44 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
TRIM41Q8WV44 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
TRIM41Q8WV44 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
TRIM41Q8WV44 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
TRIM41Q8WV44 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
TRIM41Q8WV44 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
TRIM41Q8WV44 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC31.03■■■□□ 2.56
TRIM41Q8WV44 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC31.03■■■□□ 2.56
TRIM41Q8WV44 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC31.03■■■□□ 2.56
TRIM41Q8WV44 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
TRIM41Q8WV44 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
TRIM41Q8WV44 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
TRIM41Q8WV44 BCRP1-201ENST00000444246 691 ntBASIC31.03■■■□□ 2.56
TRIM41Q8WV44 TEN1-204ENST00000588202 862 ntTSL 3 BASIC31.03■■■□□ 2.56
TRIM41Q8WV44 AL008721.1-201ENST00000609964 604 ntBASIC31.03■■■□□ 2.56
TRIM41Q8WV44 AL355877.3-201ENST00000622820 899 ntBASIC31.03■■■□□ 2.56
TRIM41Q8WV44 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
TRIM41Q8WV44 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
TRIM41Q8WV44 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
TRIM41Q8WV44 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
TRIM41Q8WV44 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC31.03■■■□□ 2.56
TRIM41Q8WV44 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
TRIM41Q8WV44 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
TRIM41Q8WV44 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
TRIM41Q8WV44 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC31.03■■■□□ 2.56
TRIM41Q8WV44 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
TRIM41Q8WV44 AC009102.3-201ENST00000623118 1491 ntBASIC31.02■■■□□ 2.56
TRIM41Q8WV44 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC31.02■■■□□ 2.56
TRIM41Q8WV44 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC31.02■■■□□ 2.56
TRIM41Q8WV44 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC31.02■■■□□ 2.56
TRIM41Q8WV44 RPS2P1-201ENST00000434010 821 ntBASIC31.02■■■□□ 2.56
TRIM41Q8WV44 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC31.02■■■□□ 2.56
TRIM41Q8WV44 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC31.02■■■□□ 2.56
TRIM41Q8WV44 AL606495.2-201ENST00000605867 535 ntBASIC31.02■■■□□ 2.56
TRIM41Q8WV44 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC31.02■■■□□ 2.56
TRIM41Q8WV44 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
TRIM41Q8WV44 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC31.02■■■□□ 2.56
TRIM41Q8WV44 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC31.02■■■□□ 2.56
TRIM41Q8WV44 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
TRIM41Q8WV44 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
TRIM41Q8WV44 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
TRIM41Q8WV44 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC31.01■■■□□ 2.56
TRIM41Q8WV44 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
TRIM41Q8WV44 PNMT-202ENST00000394246 821 ntTSL 2 BASIC31.01■■■□□ 2.55
TRIM41Q8WV44 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
TRIM41Q8WV44 AC018712.1-201ENST00000455767 687 ntBASIC31.01■■■□□ 2.55
TRIM41Q8WV44 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC31.01■■■□□ 2.55
TRIM41Q8WV44 AC005332.3-201ENST00000589904 676 ntBASIC31.01■■■□□ 2.55
TRIM41Q8WV44 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC31.01■■■□□ 2.55
TRIM41Q8WV44 AC024563.2-201ENST00000603282 481 ntBASIC31.01■■■□□ 2.55
TRIM41Q8WV44 FAM215A-202ENST00000632077 792 ntBASIC31.01■■■□□ 2.55
TRIM41Q8WV44 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC31.01■■■□□ 2.55
TRIM41Q8WV44 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC31.01■■■□□ 2.55
TRIM41Q8WV44 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC31.01■■■□□ 2.55
TRIM41Q8WV44 Z83836.1-201ENST00000624605 1642 ntBASIC31.01■■■□□ 2.55
TRIM41Q8WV44 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC31.01■■■□□ 2.55
TRIM41Q8WV44 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC31.01■■■□□ 2.55
TRIM41Q8WV44 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
TRIM41Q8WV44 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC31■■■□□ 2.55
TRIM41Q8WV44 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC31■■■□□ 2.55
TRIM41Q8WV44 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
TRIM41Q8WV44 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
TRIM41Q8WV44 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
TRIM41Q8WV44 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC31■■■□□ 2.55
TRIM41Q8WV44 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC31■■■□□ 2.55
TRIM41Q8WV44 BET1L-206ENST00000486280 665 ntTSL 3 BASIC31■■■□□ 2.55
TRIM41Q8WV44 AP003733.1-201ENST00000491725 852 ntBASIC31■■■□□ 2.55
TRIM41Q8WV44 AC145285.3-201ENST00000564603 959 ntBASIC31■■■□□ 2.55
TRIM41Q8WV44 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC31■■■□□ 2.55
TRIM41Q8WV44 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC31■■■□□ 2.55
TRIM41Q8WV44 AF228730.6-201ENST00000641497 218 ntBASIC31■■■□□ 2.55
TRIM41Q8WV44 AC084121.3-201ENST00000641716 218 ntBASIC31■■■□□ 2.55
TRIM41Q8WV44 AC105233.6-201ENST00000642093 218 ntBASIC31■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms