Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PRUNE2Q8WUY3 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PRUNE2Q8WUY3 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PRUNE2Q8WUY3 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PRUNE2Q8WUY3 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PRUNE2Q8WUY3 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRUNE2Q8WUY3 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRUNE2Q8WUY3 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRUNE2Q8WUY3 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRUNE2Q8WUY3 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
PRUNE2Q8WUY3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.9■□□□□ 0.62
PRUNE2Q8WUY3 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PRUNE2Q8WUY3 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.89■□□□□ 0.62
PRUNE2Q8WUY3 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
PRUNE2Q8WUY3 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
PRUNE2Q8WUY3 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PRUNE2Q8WUY3 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PRUNE2Q8WUY3 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
PRUNE2Q8WUY3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRUNE2Q8WUY3 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PRUNE2Q8WUY3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.89■□□□□ 0.61
PRUNE2Q8WUY3 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.89■□□□□ 0.61
PRUNE2Q8WUY3 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.89■□□□□ 0.61
PRUNE2Q8WUY3 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.89■□□□□ 0.61
PRUNE2Q8WUY3 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.89■□□□□ 0.61
PRUNE2Q8WUY3 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PRUNE2Q8WUY3 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.89■□□□□ 0.61
PRUNE2Q8WUY3 TSPY16P-201ENST00000449843 468 ntBASIC18.89■□□□□ 0.61
PRUNE2Q8WUY3 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRUNE2Q8WUY3 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PRUNE2Q8WUY3 ELK2BP-201ENST00000415014 1224 ntBASIC18.88■□□□□ 0.61
PRUNE2Q8WUY3 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.88■□□□□ 0.61
PRUNE2Q8WUY3 AC105339.1-204ENST00000636249 355 ntBASIC18.88■□□□□ 0.61
PRUNE2Q8WUY3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRUNE2Q8WUY3 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRUNE2Q8WUY3 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRUNE2Q8WUY3 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.88■□□□□ 0.61
PRUNE2Q8WUY3 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRUNE2Q8WUY3 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PRUNE2Q8WUY3 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRUNE2Q8WUY3 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRUNE2Q8WUY3 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRUNE2Q8WUY3 PMS2P4-201ENST00000412466 1052 ntBASIC18.88■□□□□ 0.61
PRUNE2Q8WUY3 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.88■□□□□ 0.61
PRUNE2Q8WUY3 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PRUNE2Q8WUY3 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
PRUNE2Q8WUY3 MIR6799-201ENST00000620297 69 ntBASIC18.88■□□□□ 0.61
PRUNE2Q8WUY3 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRUNE2Q8WUY3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.88■□□□□ 0.61
PRUNE2Q8WUY3 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PRUNE2Q8WUY3 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.88■□□□□ 0.61
PRUNE2Q8WUY3 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
PRUNE2Q8WUY3 AC004877.2-201ENST00000623941 599 ntBASIC18.87■□□□□ 0.61
PRUNE2Q8WUY3 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PRUNE2Q8WUY3 KRT8P32-201ENST00000512863 1461 ntBASIC18.87■□□□□ 0.61
PRUNE2Q8WUY3 Z98044.1-201ENST00000632503 1764 ntBASIC18.87■□□□□ 0.61
PRUNE2Q8WUY3 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRUNE2Q8WUY3 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRUNE2Q8WUY3 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRUNE2Q8WUY3 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRUNE2Q8WUY3 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRUNE2Q8WUY3 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.87■□□□□ 0.61
PRUNE2Q8WUY3 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
PRUNE2Q8WUY3 CRB3P1-201ENST00000449338 276 ntBASIC18.87■□□□□ 0.61
PRUNE2Q8WUY3 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.87■□□□□ 0.61
PRUNE2Q8WUY3 AC051619.7-201ENST00000568314 623 ntBASIC18.87■□□□□ 0.61
PRUNE2Q8WUY3 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.87■□□□□ 0.61
PRUNE2Q8WUY3 AC020907.5-201ENST00000624372 1936 ntBASIC18.87■□□□□ 0.61
PRUNE2Q8WUY3 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRUNE2Q8WUY3 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRUNE2Q8WUY3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.87■□□□□ 0.61
PRUNE2Q8WUY3 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRUNE2Q8WUY3 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.87■□□□□ 0.61
PRUNE2Q8WUY3 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRUNE2Q8WUY3 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
PRUNE2Q8WUY3 NME2P1-201ENST00000426182 414 ntBASIC18.87■□□□□ 0.61
PRUNE2Q8WUY3 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.87■□□□□ 0.61
PRUNE2Q8WUY3 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
PRUNE2Q8WUY3 AC025678.2-201ENST00000562061 970 ntBASIC18.87■□□□□ 0.61
PRUNE2Q8WUY3 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.87■□□□□ 0.61
PRUNE2Q8WUY3 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRUNE2Q8WUY3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRUNE2Q8WUY3 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRUNE2Q8WUY3 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRUNE2Q8WUY3 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRUNE2Q8WUY3 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRUNE2Q8WUY3 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRUNE2Q8WUY3 TFAMP1-201ENST00000412727 736 ntBASIC18.86■□□□□ 0.61
PRUNE2Q8WUY3 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PRUNE2Q8WUY3 AC004449.1-201ENST00000564240 433 ntBASIC18.86■□□□□ 0.61
PRUNE2Q8WUY3 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.86■□□□□ 0.61
PRUNE2Q8WUY3 OR7E47P-204ENST00000575924 449 ntBASIC18.86■□□□□ 0.61
PRUNE2Q8WUY3 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC18.86■□□□□ 0.61
PRUNE2Q8WUY3 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRUNE2Q8WUY3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PRUNE2Q8WUY3 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRUNE2Q8WUY3 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRUNE2Q8WUY3 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRUNE2Q8WUY3 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRUNE2Q8WUY3 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms