Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 AC079781.4-201ENST00000641908 219 ntBASIC20.77■□□□□ 0.92
U2AF1L4Q8WU68 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
U2AF1L4Q8WU68 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
U2AF1L4Q8WU68 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
U2AF1L4Q8WU68 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.77■□□□□ 0.91
U2AF1L4Q8WU68 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
U2AF1L4Q8WU68 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
U2AF1L4Q8WU68 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.77■□□□□ 0.91
U2AF1L4Q8WU68 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
U2AF1L4Q8WU68 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
U2AF1L4Q8WU68 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
U2AF1L4Q8WU68 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
U2AF1L4Q8WU68 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
U2AF1L4Q8WU68 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
U2AF1L4Q8WU68 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
U2AF1L4Q8WU68 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
U2AF1L4Q8WU68 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.76■□□□□ 0.91
U2AF1L4Q8WU68 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
U2AF1L4Q8WU68 RPS2P28-201ENST00000314255 741 ntBASIC20.76■□□□□ 0.91
U2AF1L4Q8WU68 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
U2AF1L4Q8WU68 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
U2AF1L4Q8WU68 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
U2AF1L4Q8WU68 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.76■□□□□ 0.91
U2AF1L4Q8WU68 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
U2AF1L4Q8WU68 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
U2AF1L4Q8WU68 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.76■□□□□ 0.91
U2AF1L4Q8WU68 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.76■□□□□ 0.91
U2AF1L4Q8WU68 FGFR3P6-201ENST00000457012 610 ntBASIC20.76■□□□□ 0.91
U2AF1L4Q8WU68 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.76■□□□□ 0.91
U2AF1L4Q8WU68 MIR3180-4-201ENST00000582223 153 ntBASIC20.76■□□□□ 0.91
U2AF1L4Q8WU68 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC20.76■□□□□ 0.91
U2AF1L4Q8WU68 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC20.76■□□□□ 0.91
U2AF1L4Q8WU68 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.76■□□□□ 0.91
U2AF1L4Q8WU68 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
U2AF1L4Q8WU68 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
U2AF1L4Q8WU68 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.76■□□□□ 0.91
U2AF1L4Q8WU68 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
U2AF1L4Q8WU68 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
U2AF1L4Q8WU68 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
U2AF1L4Q8WU68 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
U2AF1L4Q8WU68 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
U2AF1L4Q8WU68 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
U2AF1L4Q8WU68 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.76■□□□□ 0.91
U2AF1L4Q8WU68 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
U2AF1L4Q8WU68 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
U2AF1L4Q8WU68 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
U2AF1L4Q8WU68 AC093503.3-201ENST00000624917 2352 ntBASIC20.75■□□□□ 0.91
U2AF1L4Q8WU68 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
U2AF1L4Q8WU68 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
U2AF1L4Q8WU68 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
U2AF1L4Q8WU68 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
U2AF1L4Q8WU68 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
U2AF1L4Q8WU68 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
U2AF1L4Q8WU68 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
U2AF1L4Q8WU68 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
U2AF1L4Q8WU68 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.75■□□□□ 0.91
U2AF1L4Q8WU68 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
U2AF1L4Q8WU68 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.75■□□□□ 0.91
U2AF1L4Q8WU68 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC20.75■□□□□ 0.91
U2AF1L4Q8WU68 IGHV3-22-201ENST00000520721 359 ntBASIC20.75■□□□□ 0.91
U2AF1L4Q8WU68 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.75■□□□□ 0.91
U2AF1L4Q8WU68 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
U2AF1L4Q8WU68 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
U2AF1L4Q8WU68 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
U2AF1L4Q8WU68 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
U2AF1L4Q8WU68 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.75■□□□□ 0.91
U2AF1L4Q8WU68 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.75■□□□□ 0.91
U2AF1L4Q8WU68 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
U2AF1L4Q8WU68 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
U2AF1L4Q8WU68 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
U2AF1L4Q8WU68 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.74■□□□□ 0.91
U2AF1L4Q8WU68 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
U2AF1L4Q8WU68 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
U2AF1L4Q8WU68 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
U2AF1L4Q8WU68 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.74■□□□□ 0.91
U2AF1L4Q8WU68 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
U2AF1L4Q8WU68 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
U2AF1L4Q8WU68 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.74■□□□□ 0.91
U2AF1L4Q8WU68 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
U2AF1L4Q8WU68 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
U2AF1L4Q8WU68 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
U2AF1L4Q8WU68 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.74■□□□□ 0.91
U2AF1L4Q8WU68 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.74■□□□□ 0.91
U2AF1L4Q8WU68 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
U2AF1L4Q8WU68 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.74■□□□□ 0.91
U2AF1L4Q8WU68 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.74■□□□□ 0.91
U2AF1L4Q8WU68 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
U2AF1L4Q8WU68 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.74■□□□□ 0.91
U2AF1L4Q8WU68 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.74■□□□□ 0.91
U2AF1L4Q8WU68 AC004967.1-201ENST00000453589 447 ntBASIC20.74■□□□□ 0.91
U2AF1L4Q8WU68 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.74■□□□□ 0.91
U2AF1L4Q8WU68 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.74■□□□□ 0.91
U2AF1L4Q8WU68 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.74■□□□□ 0.91
U2AF1L4Q8WU68 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.74■□□□□ 0.91
U2AF1L4Q8WU68 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
U2AF1L4Q8WU68 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
U2AF1L4Q8WU68 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.74■□□□□ 0.91
U2AF1L4Q8WU68 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
U2AF1L4Q8WU68 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
U2AF1L4Q8WU68 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms