Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
TMC1Q8TDI8 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
TMC1Q8TDI8 AC126763.1-201ENST00000552015 2118 ntBASIC25.28■■□□□ 1.64
TMC1Q8TDI8 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
TMC1Q8TDI8 AC233702.3-201ENST00000578656 1387 ntBASIC25.28■■□□□ 1.64
TMC1Q8TDI8 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
TMC1Q8TDI8 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
TMC1Q8TDI8 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC25.28■■□□□ 1.64
TMC1Q8TDI8 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC25.28■■□□□ 1.64
TMC1Q8TDI8 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
TMC1Q8TDI8 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
TMC1Q8TDI8 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC25.27■■□□□ 1.64
TMC1Q8TDI8 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
TMC1Q8TDI8 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
TMC1Q8TDI8 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC25.27■■□□□ 1.64
TMC1Q8TDI8 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
TMC1Q8TDI8 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC25.27■■□□□ 1.64
TMC1Q8TDI8 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC25.27■■□□□ 1.64
TMC1Q8TDI8 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
TMC1Q8TDI8 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
TMC1Q8TDI8 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC25.27■■□□□ 1.64
TMC1Q8TDI8 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC25.27■■□□□ 1.64
TMC1Q8TDI8 AL845331.1-201ENST00000424978 1190 ntBASIC25.27■■□□□ 1.64
TMC1Q8TDI8 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
TMC1Q8TDI8 RN7SL606P-201ENST00000472779 293 ntBASIC25.27■■□□□ 1.64
TMC1Q8TDI8 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC25.27■■□□□ 1.64
TMC1Q8TDI8 AC012615.1-201ENST00000565797 1299 ntBASIC25.27■■□□□ 1.64
TMC1Q8TDI8 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC25.27■■□□□ 1.64
TMC1Q8TDI8 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
TMC1Q8TDI8 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC25.27■■□□□ 1.64
TMC1Q8TDI8 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
TMC1Q8TDI8 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
TMC1Q8TDI8 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
TMC1Q8TDI8 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC25.27■■□□□ 1.64
TMC1Q8TDI8 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
TMC1Q8TDI8 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC25.26■■□□□ 1.63
TMC1Q8TDI8 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC25.26■■□□□ 1.63
TMC1Q8TDI8 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
TMC1Q8TDI8 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
TMC1Q8TDI8 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
TMC1Q8TDI8 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
TMC1Q8TDI8 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
TMC1Q8TDI8 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
TMC1Q8TDI8 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC25.26■■□□□ 1.63
TMC1Q8TDI8 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC25.26■■□□□ 1.63
TMC1Q8TDI8 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
TMC1Q8TDI8 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC25.26■■□□□ 1.63
TMC1Q8TDI8 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC25.26■■□□□ 1.63
TMC1Q8TDI8 AC104819.1-201ENST00000504587 486 ntBASIC25.26■■□□□ 1.63
TMC1Q8TDI8 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC25.26■■□□□ 1.63
TMC1Q8TDI8 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC25.26■■□□□ 1.63
TMC1Q8TDI8 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
TMC1Q8TDI8 TBCB-205ENST00000585746 875 ntTSL 3 BASIC25.26■■□□□ 1.63
TMC1Q8TDI8 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC25.26■■□□□ 1.63
TMC1Q8TDI8 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC25.26■■□□□ 1.63
TMC1Q8TDI8 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC25.26■■□□□ 1.63
TMC1Q8TDI8 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
TMC1Q8TDI8 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
TMC1Q8TDI8 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC25.26■■□□□ 1.63
TMC1Q8TDI8 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
TMC1Q8TDI8 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC25.26■■□□□ 1.63
TMC1Q8TDI8 MCC-208ENST00000514701 2855 ntTSL 2 BASIC25.26■■□□□ 1.63
TMC1Q8TDI8 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
TMC1Q8TDI8 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
TMC1Q8TDI8 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
TMC1Q8TDI8 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
TMC1Q8TDI8 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC25.25■■□□□ 1.63
TMC1Q8TDI8 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
TMC1Q8TDI8 AC091607.1-201ENST00000490318 1060 ntBASIC25.25■■□□□ 1.63
TMC1Q8TDI8 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC25.25■■□□□ 1.63
TMC1Q8TDI8 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
TMC1Q8TDI8 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TMC1Q8TDI8 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC25.25■■□□□ 1.63
TMC1Q8TDI8 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC25.25■■□□□ 1.63
TMC1Q8TDI8 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC25.25■■□□□ 1.63
TMC1Q8TDI8 WDR88-203ENST00000592765 651 ntTSL 5 BASIC25.25■■□□□ 1.63
TMC1Q8TDI8 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
TMC1Q8TDI8 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC25.25■■□□□ 1.63
TMC1Q8TDI8 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
TMC1Q8TDI8 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TMC1Q8TDI8 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
TMC1Q8TDI8 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TMC1Q8TDI8 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
TMC1Q8TDI8 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TMC1Q8TDI8 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
TMC1Q8TDI8 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC25.25■■□□□ 1.63
TMC1Q8TDI8 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TMC1Q8TDI8 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
TMC1Q8TDI8 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TMC1Q8TDI8 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TMC1Q8TDI8 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC25.25■■□□□ 1.63
TMC1Q8TDI8 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
TMC1Q8TDI8 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
TMC1Q8TDI8 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
TMC1Q8TDI8 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
TMC1Q8TDI8 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
TMC1Q8TDI8 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
TMC1Q8TDI8 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
TMC1Q8TDI8 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
TMC1Q8TDI8 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC25.24■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms