Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
ALMS1Q8TCU4 BCAR1-209ENST00000546196 1340 ntBASIC12.18□□□□□ -0.46
ALMS1Q8TCU4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ALMS1Q8TCU4 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ALMS1Q8TCU4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
ALMS1Q8TCU4 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ALMS1Q8TCU4 ADK-206ENST00000541550 2222 ntTSL 2 BASIC12.18□□□□□ -0.46
ALMS1Q8TCU4 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC12.18□□□□□ -0.46
ALMS1Q8TCU4 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ALMS1Q8TCU4 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
ALMS1Q8TCU4 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ALMS1Q8TCU4 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ALMS1Q8TCU4 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ALMS1Q8TCU4 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC12.18□□□□□ -0.46
ALMS1Q8TCU4 MEIS3P1-201ENST00000495167 958 ntBASIC12.18□□□□□ -0.46
ALMS1Q8TCU4 NMU-203ENST00000507338 658 ntTSL 3 BASIC12.18□□□□□ -0.46
ALMS1Q8TCU4 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ALMS1Q8TCU4 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC12.18□□□□□ -0.46
ALMS1Q8TCU4 AC008687.5-201ENST00000593746 558 ntBASIC12.18□□□□□ -0.46
ALMS1Q8TCU4 AD001527.2-201ENST00000622994 785 ntBASIC12.18□□□□□ -0.46
ALMS1Q8TCU4 AC073592.5-201ENST00000624854 528 ntBASIC12.18□□□□□ -0.46
ALMS1Q8TCU4 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC12.17□□□□□ -0.46
ALMS1Q8TCU4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
ALMS1Q8TCU4 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ALMS1Q8TCU4 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC12.17□□□□□ -0.46
ALMS1Q8TCU4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ALMS1Q8TCU4 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ALMS1Q8TCU4 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ALMS1Q8TCU4 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ALMS1Q8TCU4 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC12.17□□□□□ -0.46
ALMS1Q8TCU4 UGT1A2P-201ENST00000454886 866 ntBASIC12.17□□□□□ -0.46
ALMS1Q8TCU4 CIPC-205ENST00000555437 566 ntTSL 3 BASIC12.17□□□□□ -0.46
ALMS1Q8TCU4 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
ALMS1Q8TCU4 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC12.17□□□□□ -0.46
ALMS1Q8TCU4 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ALMS1Q8TCU4 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ALMS1Q8TCU4 FEM1AP3-201ENST00000403722 1741 ntBASIC12.17□□□□□ -0.46
ALMS1Q8TCU4 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ALMS1Q8TCU4 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC12.17□□□□□ -0.46
ALMS1Q8TCU4 SIGLEC30P-201ENST00000455569 941 ntBASIC12.17□□□□□ -0.46
ALMS1Q8TCU4 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ALMS1Q8TCU4 AC092902.6-201ENST00000641783 218 ntBASIC12.17□□□□□ -0.46
ALMS1Q8TCU4 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC12.17□□□□□ -0.46
ALMS1Q8TCU4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ALMS1Q8TCU4 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
ALMS1Q8TCU4 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC12.17□□□□□ -0.46
ALMS1Q8TCU4 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ALMS1Q8TCU4 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ALMS1Q8TCU4 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC12.17□□□□□ -0.46
ALMS1Q8TCU4 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
ALMS1Q8TCU4 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC12.17□□□□□ -0.46
ALMS1Q8TCU4 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
ALMS1Q8TCU4 MIR4751-201ENST00000578027 74 ntBASIC12.17□□□□□ -0.46
ALMS1Q8TCU4 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
ALMS1Q8TCU4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ALMS1Q8TCU4 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC12.17□□□□□ -0.46
ALMS1Q8TCU4 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ALMS1Q8TCU4 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC12.16□□□□□ -0.46
ALMS1Q8TCU4 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC12.16□□□□□ -0.46
ALMS1Q8TCU4 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC12.16□□□□□ -0.46
ALMS1Q8TCU4 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC12.16□□□□□ -0.46
ALMS1Q8TCU4 AC105339.1-204ENST00000636249 355 ntBASIC12.16□□□□□ -0.46
ALMS1Q8TCU4 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ALMS1Q8TCU4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ALMS1Q8TCU4 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ALMS1Q8TCU4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ALMS1Q8TCU4 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC12.16□□□□□ -0.46
ALMS1Q8TCU4 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ALMS1Q8TCU4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC12.16□□□□□ -0.46
ALMS1Q8TCU4 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ALMS1Q8TCU4 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
ALMS1Q8TCU4 HLA-DRB6-201ENST00000411500 1235 ntBASIC12.16□□□□□ -0.46
ALMS1Q8TCU4 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ALMS1Q8TCU4 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC12.16□□□□□ -0.46
ALMS1Q8TCU4 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC12.16□□□□□ -0.46
ALMS1Q8TCU4 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC12.16□□□□□ -0.46
ALMS1Q8TCU4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC12.16□□□□□ -0.46
ALMS1Q8TCU4 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ALMS1Q8TCU4 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ALMS1Q8TCU4 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ALMS1Q8TCU4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ALMS1Q8TCU4 MIR661-201ENST00000384842 89 ntBASIC12.16□□□□□ -0.46
ALMS1Q8TCU4 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC12.16□□□□□ -0.46
ALMS1Q8TCU4 AC010654.1-201ENST00000615722 808 ntBASIC12.16□□□□□ -0.46
ALMS1Q8TCU4 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
ALMS1Q8TCU4 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ALMS1Q8TCU4 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ALMS1Q8TCU4 LINC00602-201ENST00000629776 2065 ntBASIC12.16□□□□□ -0.46
ALMS1Q8TCU4 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
ALMS1Q8TCU4 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ALMS1Q8TCU4 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC12.15□□□□□ -0.46
ALMS1Q8TCU4 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
ALMS1Q8TCU4 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ALMS1Q8TCU4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC12.15□□□□□ -0.46
ALMS1Q8TCU4 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ALMS1Q8TCU4 AC096633.1-201ENST00000422446 749 ntBASIC12.15□□□□□ -0.46
ALMS1Q8TCU4 AC005034.1-201ENST00000426657 489 ntBASIC12.15□□□□□ -0.46
ALMS1Q8TCU4 AP000344.2-201ENST00000512987 629 ntBASIC12.15□□□□□ -0.46
ALMS1Q8TCU4 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC12.15□□□□□ -0.46
ALMS1Q8TCU4 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms