Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 ING5-213ENST00000636051 4199 ntTSL 5 BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 CHCHD2P8-201ENST00000429873 447 ntBASIC5.62□□□□□ -1.51
SYNE1Q8NF91 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 AP003680.1-201ENST00000598970 3660 ntBASIC5.62□□□□□ -1.51
SYNE1Q8NF91 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 AF238378.1-201ENST00000526806 358 ntBASIC5.62□□□□□ -1.51
SYNE1Q8NF91 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 AC006538.3-201ENST00000612495 578 ntBASIC5.62□□□□□ -1.51
SYNE1Q8NF91 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 CALM3-211ENST00000598871 561 ntTSL 4 BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 WDR6-223ENST00000627177 207 ntTSL 2 BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC5.62□□□□□ -1.51
SYNE1Q8NF91 AC112497.1-201ENST00000624824 639 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms