Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
HERC6Q8IVU3 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HERC6Q8IVU3 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HERC6Q8IVU3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.64■□□□□ 0.73
HERC6Q8IVU3 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HERC6Q8IVU3 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HERC6Q8IVU3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.64■□□□□ 0.73
HERC6Q8IVU3 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HERC6Q8IVU3 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.64■□□□□ 0.73
HERC6Q8IVU3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
HERC6Q8IVU3 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HERC6Q8IVU3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HERC6Q8IVU3 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HERC6Q8IVU3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HERC6Q8IVU3 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
HERC6Q8IVU3 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
HERC6Q8IVU3 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HERC6Q8IVU3 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HERC6Q8IVU3 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HERC6Q8IVU3 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
HERC6Q8IVU3 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
HERC6Q8IVU3 HEIH-201ENST00000623091 1652 ntBASIC19.63■□□□□ 0.73
HERC6Q8IVU3 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.63■□□□□ 0.73
HERC6Q8IVU3 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HERC6Q8IVU3 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
HERC6Q8IVU3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HERC6Q8IVU3 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HERC6Q8IVU3 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HERC6Q8IVU3 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HERC6Q8IVU3 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
HERC6Q8IVU3 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HERC6Q8IVU3 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.63■□□□□ 0.73
HERC6Q8IVU3 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HERC6Q8IVU3 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
HERC6Q8IVU3 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HERC6Q8IVU3 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.63■□□□□ 0.73
HERC6Q8IVU3 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.63■□□□□ 0.73
HERC6Q8IVU3 DNAJB3-201ENST00000446806 729 ntBASIC19.63■□□□□ 0.73
HERC6Q8IVU3 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HERC6Q8IVU3 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.63■□□□□ 0.73
HERC6Q8IVU3 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.63■□□□□ 0.73
HERC6Q8IVU3 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HERC6Q8IVU3 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HERC6Q8IVU3 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
HERC6Q8IVU3 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HERC6Q8IVU3 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.62■□□□□ 0.73
HERC6Q8IVU3 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HERC6Q8IVU3 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HERC6Q8IVU3 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
HERC6Q8IVU3 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
HERC6Q8IVU3 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HERC6Q8IVU3 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HERC6Q8IVU3 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HERC6Q8IVU3 MIR149-201ENST00000384879 89 ntBASIC19.62■□□□□ 0.73
HERC6Q8IVU3 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.62■□□□□ 0.73
HERC6Q8IVU3 AC004967.1-201ENST00000453589 447 ntBASIC19.62■□□□□ 0.73
HERC6Q8IVU3 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.62■□□□□ 0.73
HERC6Q8IVU3 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.62■□□□□ 0.73
HERC6Q8IVU3 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.62■□□□□ 0.73
HERC6Q8IVU3 AC040169.1-201ENST00000565382 521 ntBASIC19.62■□□□□ 0.73
HERC6Q8IVU3 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.62■□□□□ 0.73
HERC6Q8IVU3 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.62■□□□□ 0.73
HERC6Q8IVU3 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.62■□□□□ 0.73
HERC6Q8IVU3 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.62■□□□□ 0.73
HERC6Q8IVU3 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
HERC6Q8IVU3 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
HERC6Q8IVU3 AL356309.3-201ENST00000624132 1934 ntBASIC19.62■□□□□ 0.73
HERC6Q8IVU3 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
HERC6Q8IVU3 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.62■□□□□ 0.73
HERC6Q8IVU3 AC141586.3-201ENST00000562166 1838 ntBASIC19.62■□□□□ 0.73
HERC6Q8IVU3 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
HERC6Q8IVU3 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HERC6Q8IVU3 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
HERC6Q8IVU3 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HERC6Q8IVU3 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
HERC6Q8IVU3 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HERC6Q8IVU3 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HERC6Q8IVU3 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HERC6Q8IVU3 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HERC6Q8IVU3 AC022898.2-201ENST00000616822 1312 ntBASIC19.61■□□□□ 0.73
HERC6Q8IVU3 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HERC6Q8IVU3 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HERC6Q8IVU3 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HERC6Q8IVU3 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.61■□□□□ 0.73
HERC6Q8IVU3 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HERC6Q8IVU3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HERC6Q8IVU3 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HERC6Q8IVU3 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HERC6Q8IVU3 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HERC6Q8IVU3 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HERC6Q8IVU3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
HERC6Q8IVU3 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.61■□□□□ 0.73
HERC6Q8IVU3 AC025062.2-201ENST00000605477 670 ntBASIC19.61■□□□□ 0.73
HERC6Q8IVU3 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HERC6Q8IVU3 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
HERC6Q8IVU3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.61■□□□□ 0.73
HERC6Q8IVU3 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
HERC6Q8IVU3 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.61■□□□□ 0.73
HERC6Q8IVU3 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
HERC6Q8IVU3 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms