Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST3H2AQ7L7L0 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HIST3H2AQ7L7L0 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HIST3H2AQ7L7L0 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.61■□□□□ 0.25
HIST3H2AQ7L7L0 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST3H2AQ7L7L0 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HIST3H2AQ7L7L0 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
HIST3H2AQ7L7L0 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HIST3H2AQ7L7L0 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST3H2AQ7L7L0 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HIST3H2AQ7L7L0 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.61■□□□□ 0.25
HIST3H2AQ7L7L0 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIST3H2AQ7L7L0 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST3H2AQ7L7L0 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST3H2AQ7L7L0 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST3H2AQ7L7L0 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST3H2AQ7L7L0 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
HIST3H2AQ7L7L0 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
HIST3H2AQ7L7L0 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
HIST3H2AQ7L7L0 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
HIST3H2AQ7L7L0 MIR149-201ENST00000384879 89 ntBASIC16.6■□□□□ 0.25
HIST3H2AQ7L7L0 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
HIST3H2AQ7L7L0 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.6■□□□□ 0.25
HIST3H2AQ7L7L0 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.6■□□□□ 0.25
HIST3H2AQ7L7L0 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.6■□□□□ 0.25
HIST3H2AQ7L7L0 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIST3H2AQ7L7L0 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.6■□□□□ 0.25
HIST3H2AQ7L7L0 NAPSB-206ENST00000562112 1266 ntBASIC16.6■□□□□ 0.25
HIST3H2AQ7L7L0 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.6■□□□□ 0.25
HIST3H2AQ7L7L0 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.6■□□□□ 0.25
HIST3H2AQ7L7L0 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
HIST3H2AQ7L7L0 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST3H2AQ7L7L0 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIST3H2AQ7L7L0 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIST3H2AQ7L7L0 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.6■□□□□ 0.25
HIST3H2AQ7L7L0 AC093677.2-201ENST00000600169 1863 ntBASIC16.6■□□□□ 0.25
HIST3H2AQ7L7L0 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST3H2AQ7L7L0 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
HIST3H2AQ7L7L0 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIST3H2AQ7L7L0 AC009102.3-201ENST00000623118 1491 ntBASIC16.6■□□□□ 0.25
HIST3H2AQ7L7L0 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST3H2AQ7L7L0 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.6■□□□□ 0.25
HIST3H2AQ7L7L0 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIST3H2AQ7L7L0 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.6■□□□□ 0.25
HIST3H2AQ7L7L0 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST3H2AQ7L7L0 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.59■□□□□ 0.25
HIST3H2AQ7L7L0 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST3H2AQ7L7L0 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HIST3H2AQ7L7L0 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST3H2AQ7L7L0 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST3H2AQ7L7L0 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HIST3H2AQ7L7L0 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HIST3H2AQ7L7L0 TSPY14P-201ENST00000303979 915 ntBASIC16.59■□□□□ 0.25
HIST3H2AQ7L7L0 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HIST3H2AQ7L7L0 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST3H2AQ7L7L0 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
HIST3H2AQ7L7L0 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST3H2AQ7L7L0 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.59■□□□□ 0.25
HIST3H2AQ7L7L0 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.59■□□□□ 0.25
HIST3H2AQ7L7L0 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.59■□□□□ 0.25
HIST3H2AQ7L7L0 AL512604.3-201ENST00000569583 964 ntBASIC16.59■□□□□ 0.25
HIST3H2AQ7L7L0 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.59■□□□□ 0.25
HIST3H2AQ7L7L0 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.59■□□□□ 0.25
HIST3H2AQ7L7L0 AC112497.1-201ENST00000624824 639 ntBASIC16.59■□□□□ 0.25
HIST3H2AQ7L7L0 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HIST3H2AQ7L7L0 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HIST3H2AQ7L7L0 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HIST3H2AQ7L7L0 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST3H2AQ7L7L0 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.59■□□□□ 0.25
HIST3H2AQ7L7L0 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HIST3H2AQ7L7L0 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST3H2AQ7L7L0 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST3H2AQ7L7L0 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.59■□□□□ 0.25
HIST3H2AQ7L7L0 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST3H2AQ7L7L0 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
HIST3H2AQ7L7L0 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HIST3H2AQ7L7L0 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST3H2AQ7L7L0 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST3H2AQ7L7L0 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HIST3H2AQ7L7L0 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST3H2AQ7L7L0 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST3H2AQ7L7L0 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.58■□□□□ 0.25
HIST3H2AQ7L7L0 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
HIST3H2AQ7L7L0 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
HIST3H2AQ7L7L0 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.58■□□□□ 0.25
HIST3H2AQ7L7L0 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HIST3H2AQ7L7L0 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
HIST3H2AQ7L7L0 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.25
HIST3H2AQ7L7L0 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
HIST3H2AQ7L7L0 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
HIST3H2AQ7L7L0 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HIST3H2AQ7L7L0 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST3H2AQ7L7L0 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HIST3H2AQ7L7L0 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.58■□□□□ 0.24
HIST3H2AQ7L7L0 MMP23A-201ENST00000234610 1017 ntBASIC16.58■□□□□ 0.24
HIST3H2AQ7L7L0 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST3H2AQ7L7L0 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST3H2AQ7L7L0 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST3H2AQ7L7L0 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.58■□□□□ 0.24
HIST3H2AQ7L7L0 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms