Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PTCHD4Q6ZW05 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PTCHD4Q6ZW05 AC106820.2-201ENST00000563775 3264 ntBASIC16.76■□□□□ 0.27
PTCHD4Q6ZW05 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTCHD4Q6ZW05 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PTCHD4Q6ZW05 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTCHD4Q6ZW05 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTCHD4Q6ZW05 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTCHD4Q6ZW05 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTCHD4Q6ZW05 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.76■□□□□ 0.27
PTCHD4Q6ZW05 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PTCHD4Q6ZW05 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PTCHD4Q6ZW05 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTCHD4Q6ZW05 RARRES2P10-201ENST00000564312 460 ntBASIC16.76■□□□□ 0.27
PTCHD4Q6ZW05 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.76■□□□□ 0.27
PTCHD4Q6ZW05 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTCHD4Q6ZW05 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.76■□□□□ 0.27
PTCHD4Q6ZW05 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.76■□□□□ 0.27
PTCHD4Q6ZW05 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTCHD4Q6ZW05 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTCHD4Q6ZW05 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTCHD4Q6ZW05 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
PTCHD4Q6ZW05 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.76■□□□□ 0.27
PTCHD4Q6ZW05 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTCHD4Q6ZW05 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
PTCHD4Q6ZW05 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PTCHD4Q6ZW05 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTCHD4Q6ZW05 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PTCHD4Q6ZW05 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.76■□□□□ 0.27
PTCHD4Q6ZW05 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.76■□□□□ 0.27
PTCHD4Q6ZW05 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PTCHD4Q6ZW05 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.75■□□□□ 0.27
PTCHD4Q6ZW05 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTCHD4Q6ZW05 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTCHD4Q6ZW05 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
PTCHD4Q6ZW05 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTCHD4Q6ZW05 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTCHD4Q6ZW05 AL096828.2-201ENST00000567259 1965 ntBASIC16.75■□□□□ 0.27
PTCHD4Q6ZW05 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTCHD4Q6ZW05 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
PTCHD4Q6ZW05 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTCHD4Q6ZW05 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.75■□□□□ 0.27
PTCHD4Q6ZW05 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTCHD4Q6ZW05 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTCHD4Q6ZW05 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
PTCHD4Q6ZW05 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTCHD4Q6ZW05 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PTCHD4Q6ZW05 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTCHD4Q6ZW05 CKBP1-201ENST00000565489 1086 ntBASIC16.75■□□□□ 0.27
PTCHD4Q6ZW05 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.75■□□□□ 0.27
PTCHD4Q6ZW05 AC073195.1-201ENST00000607241 877 ntBASIC16.75■□□□□ 0.27
PTCHD4Q6ZW05 AC130371.2-201ENST00000619443 611 ntBASIC16.75■□□□□ 0.27
PTCHD4Q6ZW05 AL359736.2-201ENST00000621992 437 ntBASIC16.75■□□□□ 0.27
PTCHD4Q6ZW05 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTCHD4Q6ZW05 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.75■□□□□ 0.27
PTCHD4Q6ZW05 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.75■□□□□ 0.27
PTCHD4Q6ZW05 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTCHD4Q6ZW05 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTCHD4Q6ZW05 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTCHD4Q6ZW05 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTCHD4Q6ZW05 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PTCHD4Q6ZW05 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTCHD4Q6ZW05 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
PTCHD4Q6ZW05 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTCHD4Q6ZW05 RCC2P3-201ENST00000418112 1537 ntBASIC16.75■□□□□ 0.27
PTCHD4Q6ZW05 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTCHD4Q6ZW05 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.75■□□□□ 0.27
PTCHD4Q6ZW05 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTCHD4Q6ZW05 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTCHD4Q6ZW05 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTCHD4Q6ZW05 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTCHD4Q6ZW05 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTCHD4Q6ZW05 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PTCHD4Q6ZW05 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTCHD4Q6ZW05 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PTCHD4Q6ZW05 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.74■□□□□ 0.27
PTCHD4Q6ZW05 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTCHD4Q6ZW05 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTCHD4Q6ZW05 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTCHD4Q6ZW05 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.74■□□□□ 0.27
PTCHD4Q6ZW05 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTCHD4Q6ZW05 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.74■□□□□ 0.27
PTCHD4Q6ZW05 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PTCHD4Q6ZW05 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
PTCHD4Q6ZW05 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PTCHD4Q6ZW05 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
PTCHD4Q6ZW05 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.74■□□□□ 0.27
PTCHD4Q6ZW05 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PTCHD4Q6ZW05 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.74■□□□□ 0.27
PTCHD4Q6ZW05 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PTCHD4Q6ZW05 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.74■□□□□ 0.27
PTCHD4Q6ZW05 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTCHD4Q6ZW05 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTCHD4Q6ZW05 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTCHD4Q6ZW05 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTCHD4Q6ZW05 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.74■□□□□ 0.27
PTCHD4Q6ZW05 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTCHD4Q6ZW05 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PTCHD4Q6ZW05 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTCHD4Q6ZW05 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms