Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
COLCA1Q6ZS62 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COLCA1Q6ZS62 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.66■□□□□ 0.1
COLCA1Q6ZS62 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
COLCA1Q6ZS62 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
COLCA1Q6ZS62 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COLCA1Q6ZS62 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COLCA1Q6ZS62 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.66■□□□□ 0.1
COLCA1Q6ZS62 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
COLCA1Q6ZS62 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COLCA1Q6ZS62 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.65■□□□□ 0.1
COLCA1Q6ZS62 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.65■□□□□ 0.1
COLCA1Q6ZS62 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COLCA1Q6ZS62 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.65■□□□□ 0.1
COLCA1Q6ZS62 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
COLCA1Q6ZS62 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
COLCA1Q6ZS62 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.65■□□□□ 0.1
COLCA1Q6ZS62 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
COLCA1Q6ZS62 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
COLCA1Q6ZS62 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
COLCA1Q6ZS62 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
COLCA1Q6ZS62 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COLCA1Q6ZS62 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
COLCA1Q6ZS62 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
COLCA1Q6ZS62 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COLCA1Q6ZS62 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COLCA1Q6ZS62 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.65■□□□□ 0.1
COLCA1Q6ZS62 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COLCA1Q6ZS62 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC15.65■□□□□ 0.1
COLCA1Q6ZS62 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
COLCA1Q6ZS62 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
COLCA1Q6ZS62 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.65■□□□□ 0.1
COLCA1Q6ZS62 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
COLCA1Q6ZS62 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.65■□□□□ 0.1
COLCA1Q6ZS62 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.65■□□□□ 0.1
COLCA1Q6ZS62 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.65■□□□□ 0.1
COLCA1Q6ZS62 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.65■□□□□ 0.1
COLCA1Q6ZS62 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.65■□□□□ 0.1
COLCA1Q6ZS62 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.65■□□□□ 0.1
COLCA1Q6ZS62 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.65■□□□□ 0.1
COLCA1Q6ZS62 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
COLCA1Q6ZS62 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COLCA1Q6ZS62 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.65■□□□□ 0.1
COLCA1Q6ZS62 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
COLCA1Q6ZS62 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.65■□□□□ 0.1
COLCA1Q6ZS62 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COLCA1Q6ZS62 AC068880.1-201ENST00000507289 2297 ntBASIC15.65■□□□□ 0.1
COLCA1Q6ZS62 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.65■□□□□ 0.1
COLCA1Q6ZS62 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
COLCA1Q6ZS62 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
COLCA1Q6ZS62 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COLCA1Q6ZS62 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.64■□□□□ 0.09
COLCA1Q6ZS62 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COLCA1Q6ZS62 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
COLCA1Q6ZS62 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COLCA1Q6ZS62 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COLCA1Q6ZS62 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COLCA1Q6ZS62 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
COLCA1Q6ZS62 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.64■□□□□ 0.09
COLCA1Q6ZS62 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COLCA1Q6ZS62 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COLCA1Q6ZS62 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
COLCA1Q6ZS62 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COLCA1Q6ZS62 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
COLCA1Q6ZS62 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COLCA1Q6ZS62 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COLCA1Q6ZS62 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC15.64■□□□□ 0.09
COLCA1Q6ZS62 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.64■□□□□ 0.09
COLCA1Q6ZS62 DUX4L26-201ENST00000489078 1255 ntBASIC15.64■□□□□ 0.09
COLCA1Q6ZS62 AC022616.7-201ENST00000525383 220 ntBASIC15.64■□□□□ 0.09
COLCA1Q6ZS62 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
COLCA1Q6ZS62 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC15.64■□□□□ 0.09
COLCA1Q6ZS62 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.64■□□□□ 0.09
COLCA1Q6ZS62 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC15.64■□□□□ 0.09
COLCA1Q6ZS62 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
COLCA1Q6ZS62 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COLCA1Q6ZS62 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
COLCA1Q6ZS62 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COLCA1Q6ZS62 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
COLCA1Q6ZS62 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.64■□□□□ 0.09
COLCA1Q6ZS62 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
COLCA1Q6ZS62 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COLCA1Q6ZS62 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COLCA1Q6ZS62 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COLCA1Q6ZS62 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
COLCA1Q6ZS62 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COLCA1Q6ZS62 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.63■□□□□ 0.09
COLCA1Q6ZS62 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COLCA1Q6ZS62 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
COLCA1Q6ZS62 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COLCA1Q6ZS62 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.63■□□□□ 0.09
COLCA1Q6ZS62 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COLCA1Q6ZS62 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
COLCA1Q6ZS62 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.63■□□□□ 0.09
COLCA1Q6ZS62 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COLCA1Q6ZS62 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COLCA1Q6ZS62 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.63■□□□□ 0.09
COLCA1Q6ZS62 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.63■□□□□ 0.09
COLCA1Q6ZS62 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
COLCA1Q6ZS62 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms