Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC21.55■■□□□ 1.04
CTR9Q6PD62 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC21.55■■□□□ 1.04
CTR9Q6PD62 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC21.55■■□□□ 1.04
CTR9Q6PD62 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTR9Q6PD62 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTR9Q6PD62 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CTR9Q6PD62 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CTR9Q6PD62 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
CTR9Q6PD62 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTR9Q6PD62 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CTR9Q6PD62 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTR9Q6PD62 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC21.55■■□□□ 1.04
CTR9Q6PD62 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC21.55■■□□□ 1.04
CTR9Q6PD62 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTR9Q6PD62 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC21.54■■□□□ 1.04
CTR9Q6PD62 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CTR9Q6PD62 TSPY12P-201ENST00000421279 868 ntBASIC21.54■■□□□ 1.04
CTR9Q6PD62 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC21.54■■□□□ 1.04
CTR9Q6PD62 AC068472.1-201ENST00000474589 881 ntBASIC21.54■■□□□ 1.04
CTR9Q6PD62 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CTR9Q6PD62 PRR29-207ENST00000580752 458 ntTSL 3 BASIC21.54■■□□□ 1.04
CTR9Q6PD62 AL353801.3-201ENST00000609898 542 ntBASIC21.54■■□□□ 1.04
CTR9Q6PD62 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CTR9Q6PD62 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CTR9Q6PD62 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CTR9Q6PD62 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CTR9Q6PD62 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTR9Q6PD62 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CTR9Q6PD62 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTR9Q6PD62 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTR9Q6PD62 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTR9Q6PD62 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CTR9Q6PD62 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.53■■□□□ 1.04
CTR9Q6PD62 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CTR9Q6PD62 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CTR9Q6PD62 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTR9Q6PD62 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTR9Q6PD62 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTR9Q6PD62 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC21.53■■□□□ 1.04
CTR9Q6PD62 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTR9Q6PD62 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC21.53■■□□□ 1.04
CTR9Q6PD62 AC012615.1-201ENST00000565797 1299 ntBASIC21.53■■□□□ 1.04
CTR9Q6PD62 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC21.53■■□□□ 1.04
CTR9Q6PD62 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC21.53■■□□□ 1.04
CTR9Q6PD62 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTR9Q6PD62 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC21.53■■□□□ 1.04
CTR9Q6PD62 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC21.53■■□□□ 1.04
CTR9Q6PD62 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
CTR9Q6PD62 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTR9Q6PD62 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
CTR9Q6PD62 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
CTR9Q6PD62 PHGDH-209ENST00000641074 1780 ntBASIC21.53■■□□□ 1.04
CTR9Q6PD62 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC21.53■■□□□ 1.04
CTR9Q6PD62 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.53■■□□□ 1.04
CTR9Q6PD62 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTR9Q6PD62 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTR9Q6PD62 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CTR9Q6PD62 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTR9Q6PD62 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC21.53■■□□□ 1.04
CTR9Q6PD62 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC21.53■■□□□ 1.04
CTR9Q6PD62 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTR9Q6PD62 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC21.52■■□□□ 1.04
CTR9Q6PD62 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC21.52■■□□□ 1.04
CTR9Q6PD62 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTR9Q6PD62 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CTR9Q6PD62 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC21.52■■□□□ 1.04
CTR9Q6PD62 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CTR9Q6PD62 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTR9Q6PD62 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTR9Q6PD62 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CTR9Q6PD62 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTR9Q6PD62 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC21.52■■□□□ 1.04
CTR9Q6PD62 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTR9Q6PD62 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CTR9Q6PD62 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC21.52■■□□□ 1.04
CTR9Q6PD62 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTR9Q6PD62 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTR9Q6PD62 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC21.52■■□□□ 1.04
CTR9Q6PD62 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC21.52■■□□□ 1.04
CTR9Q6PD62 IGHV3-47-201ENST00000425060 335 ntBASIC21.52■■□□□ 1.04
CTR9Q6PD62 NUS1P1-201ENST00000446295 882 ntBASIC21.52■■□□□ 1.04
CTR9Q6PD62 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CTR9Q6PD62 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC21.52■■□□□ 1.04
CTR9Q6PD62 PNN-202ENST00000553331 656 ntTSL 3 BASIC21.52■■□□□ 1.04
CTR9Q6PD62 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC21.52■■□□□ 1.04
CTR9Q6PD62 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTR9Q6PD62 ANKRD20A8P-203ENST00000641373 517 ntBASIC21.52■■□□□ 1.04
CTR9Q6PD62 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTR9Q6PD62 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTR9Q6PD62 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CTR9Q6PD62 AC132938.6-201ENST00000623828 1655 ntBASIC21.52■■□□□ 1.04
CTR9Q6PD62 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CTR9Q6PD62 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CTR9Q6PD62 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CTR9Q6PD62 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC21.52■■□□□ 1.03
CTR9Q6PD62 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTR9Q6PD62 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CTR9Q6PD62 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTR9Q6PD62 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTR9Q6PD62 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms