Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC12.18□□□□□ -0.46
VPS13DQ5THJ4 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VPS13DQ5THJ4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC12.18□□□□□ -0.46
VPS13DQ5THJ4 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC12.18□□□□□ -0.46
VPS13DQ5THJ4 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC12.18□□□□□ -0.46
VPS13DQ5THJ4 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC12.18□□□□□ -0.46
VPS13DQ5THJ4 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
VPS13DQ5THJ4 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC12.18□□□□□ -0.46
VPS13DQ5THJ4 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC12.18□□□□□ -0.46
VPS13DQ5THJ4 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC12.17□□□□□ -0.46
VPS13DQ5THJ4 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13DQ5THJ4 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
VPS13DQ5THJ4 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13DQ5THJ4 VN2R19P-201ENST00000442399 1052 ntBASIC12.17□□□□□ -0.46
VPS13DQ5THJ4 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13DQ5THJ4 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13DQ5THJ4 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13DQ5THJ4 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13DQ5THJ4 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13DQ5THJ4 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13DQ5THJ4 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13DQ5THJ4 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC12.17□□□□□ -0.46
VPS13DQ5THJ4 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13DQ5THJ4 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13DQ5THJ4 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13DQ5THJ4 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13DQ5THJ4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC12.17□□□□□ -0.46
VPS13DQ5THJ4 PDPK2P-202ENST00000562415 1191 ntBASIC12.17□□□□□ -0.46
VPS13DQ5THJ4 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC12.17□□□□□ -0.46
VPS13DQ5THJ4 COX5A-206ENST00000568783 571 ntTSL 3 BASIC12.17□□□□□ -0.46
VPS13DQ5THJ4 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13DQ5THJ4 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13DQ5THJ4 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC12.17□□□□□ -0.46
VPS13DQ5THJ4 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
VPS13DQ5THJ4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC12.17□□□□□ -0.46
VPS13DQ5THJ4 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC12.17□□□□□ -0.46
VPS13DQ5THJ4 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13DQ5THJ4 AP002414.3-201ENST00000589352 1468 ntBASIC12.17□□□□□ -0.46
VPS13DQ5THJ4 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC12.17□□□□□ -0.46
VPS13DQ5THJ4 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC12.17□□□□□ -0.46
VPS13DQ5THJ4 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC12.17□□□□□ -0.46
VPS13DQ5THJ4 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC12.17□□□□□ -0.46
VPS13DQ5THJ4 AC105339.3-201ENST00000560043 636 ntBASIC12.17□□□□□ -0.46
VPS13DQ5THJ4 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC12.17□□□□□ -0.46
VPS13DQ5THJ4 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC12.17□□□□□ -0.46
VPS13DQ5THJ4 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13DQ5THJ4 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13DQ5THJ4 AD001527.2-201ENST00000622994 785 ntBASIC12.16□□□□□ -0.46
VPS13DQ5THJ4 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13DQ5THJ4 AC002310.6-201ENST00000624451 1377 ntBASIC12.16□□□□□ -0.46
VPS13DQ5THJ4 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13DQ5THJ4 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC12.16□□□□□ -0.46
VPS13DQ5THJ4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13DQ5THJ4 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13DQ5THJ4 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC12.16□□□□□ -0.46
VPS13DQ5THJ4 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13DQ5THJ4 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13DQ5THJ4 CFL1-202ENST00000524553 860 ntTSL 2 BASIC12.16□□□□□ -0.46
VPS13DQ5THJ4 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13DQ5THJ4 RPS15-207ENST00000591032 550 ntTSL 3 BASIC12.16□□□□□ -0.46
VPS13DQ5THJ4 MTDHP4-201ENST00000600287 670 ntBASIC12.16□□□□□ -0.46
VPS13DQ5THJ4 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13DQ5THJ4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC12.16□□□□□ -0.46
VPS13DQ5THJ4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13DQ5THJ4 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13DQ5THJ4 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC12.16□□□□□ -0.46
VPS13DQ5THJ4 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC12.16□□□□□ -0.46
VPS13DQ5THJ4 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13DQ5THJ4 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
VPS13DQ5THJ4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
VPS13DQ5THJ4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13DQ5THJ4 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13DQ5THJ4 METTL21AP1-201ENST00000438852 635 ntBASIC12.16□□□□□ -0.46
VPS13DQ5THJ4 BX005266.1-201ENST00000473402 457 ntBASIC12.16□□□□□ -0.46
VPS13DQ5THJ4 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC12.16□□□□□ -0.46
VPS13DQ5THJ4 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC12.16□□□□□ -0.46
VPS13DQ5THJ4 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
VPS13DQ5THJ4 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13DQ5THJ4 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC12.16□□□□□ -0.46
VPS13DQ5THJ4 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13DQ5THJ4 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13DQ5THJ4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13DQ5THJ4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
VPS13DQ5THJ4 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13DQ5THJ4 AL139400.1-201ENST00000366220 510 ntBASIC12.16□□□□□ -0.46
VPS13DQ5THJ4 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC12.16□□□□□ -0.46
VPS13DQ5THJ4 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
VPS13DQ5THJ4 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC12.16□□□□□ -0.46
VPS13DQ5THJ4 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC12.16□□□□□ -0.46
VPS13DQ5THJ4 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC12.16□□□□□ -0.46
VPS13DQ5THJ4 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC12.16□□□□□ -0.46
VPS13DQ5THJ4 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC12.15□□□□□ -0.46
VPS13DQ5THJ4 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
VPS13DQ5THJ4 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VPS13DQ5THJ4 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC12.15□□□□□ -0.46
VPS13DQ5THJ4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VPS13DQ5THJ4 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VPS13DQ5THJ4 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC12.15□□□□□ -0.46
VPS13DQ5THJ4 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VPS13DQ5THJ4 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms