Protein–RNA interactions for Protein: Q12772

SREBF2, Sterol regulatory element-binding protein 2, humanhuman

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2Q12772 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SREBF2Q12772 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
SREBF2Q12772 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SREBF2Q12772 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC20.72■□□□□ 0.91
SREBF2Q12772 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.72■□□□□ 0.91
SREBF2Q12772 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SREBF2Q12772 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SREBF2Q12772 AC099343.3-201ENST00000605834 2503 ntBASIC20.72■□□□□ 0.91
SREBF2Q12772 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SREBF2Q12772 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.72■□□□□ 0.91
SREBF2Q12772 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SREBF2Q12772 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SREBF2Q12772 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SREBF2Q12772 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.72■□□□□ 0.91
SREBF2Q12772 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
SREBF2Q12772 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SREBF2Q12772 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SREBF2Q12772 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SREBF2Q12772 SPDYE21P-201ENST00000413323 827 ntBASIC20.72■□□□□ 0.91
SREBF2Q12772 AC108073.2-201ENST00000464002 357 ntBASIC20.72■□□□□ 0.91
SREBF2Q12772 AP000344.2-201ENST00000512987 629 ntBASIC20.72■□□□□ 0.91
SREBF2Q12772 CD63-210ENST00000550776 870 ntTSL 5 BASIC20.72■□□□□ 0.91
SREBF2Q12772 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.72■□□□□ 0.91
SREBF2Q12772 GREM1-201ENST00000560677 623 ntTSL 4 BASIC20.72■□□□□ 0.91
SREBF2Q12772 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.72■□□□□ 0.91
SREBF2Q12772 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC20.72■□□□□ 0.91
SREBF2Q12772 METTL23-205ENST00000588302 925 ntTSL 5 BASIC20.72■□□□□ 0.91
SREBF2Q12772 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SREBF2Q12772 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SREBF2Q12772 AC004817.3-201ENST00000602957 2129 ntBASIC20.72■□□□□ 0.91
SREBF2Q12772 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SREBF2Q12772 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SREBF2Q12772 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.72■□□□□ 0.91
SREBF2Q12772 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SREBF2Q12772 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SREBF2Q12772 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SREBF2Q12772 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.71■□□□□ 0.91
SREBF2Q12772 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SREBF2Q12772 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SREBF2Q12772 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
SREBF2Q12772 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SREBF2Q12772 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SREBF2Q12772 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SREBF2Q12772 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SREBF2Q12772 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SREBF2Q12772 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC20.71■□□□□ 0.91
SREBF2Q12772 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
SREBF2Q12772 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.71■□□□□ 0.91
SREBF2Q12772 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC20.71■□□□□ 0.91
SREBF2Q12772 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SREBF2Q12772 PUS1-205ENST00000535067 838 ntTSL 3 BASIC20.71■□□□□ 0.91
SREBF2Q12772 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC20.71■□□□□ 0.91
SREBF2Q12772 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC20.71■□□□□ 0.91
SREBF2Q12772 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SREBF2Q12772 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.71■□□□□ 0.91
SREBF2Q12772 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.71■□□□□ 0.91
SREBF2Q12772 AC004706.3-202ENST00000621574 984 ntBASIC20.71■□□□□ 0.91
SREBF2Q12772 AD001527.2-201ENST00000622994 785 ntBASIC20.71■□□□□ 0.91
SREBF2Q12772 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC20.71■□□□□ 0.91
SREBF2Q12772 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SREBF2Q12772 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SREBF2Q12772 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SREBF2Q12772 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SREBF2Q12772 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.71■□□□□ 0.91
SREBF2Q12772 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SREBF2Q12772 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SREBF2Q12772 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SREBF2Q12772 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SREBF2Q12772 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SREBF2Q12772 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
SREBF2Q12772 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
SREBF2Q12772 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SREBF2Q12772 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SREBF2Q12772 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.7■□□□□ 0.9
SREBF2Q12772 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SREBF2Q12772 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SREBF2Q12772 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SREBF2Q12772 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SREBF2Q12772 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC20.7■□□□□ 0.9
SREBF2Q12772 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SREBF2Q12772 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SREBF2Q12772 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC20.7■□□□□ 0.9
SREBF2Q12772 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC20.7■□□□□ 0.9
SREBF2Q12772 AC122714.2-201ENST00000502787 707 ntBASIC20.7■□□□□ 0.9
SREBF2Q12772 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
SREBF2Q12772 RNF34-208ENST00000555076 593 ntTSL 3 BASIC20.7■□□□□ 0.9
SREBF2Q12772 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC20.7■□□□□ 0.9
SREBF2Q12772 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC20.7■□□□□ 0.9
SREBF2Q12772 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.7■□□□□ 0.9
SREBF2Q12772 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SREBF2Q12772 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
SREBF2Q12772 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SREBF2Q12772 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SREBF2Q12772 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SREBF2Q12772 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SREBF2Q12772 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SREBF2Q12772 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.7■□□□□ 0.9
SREBF2Q12772 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.7■□□□□ 0.9
SREBF2Q12772 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.69■□□□□ 0.9
SREBF2Q12772 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms