Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC11.19□□□□□ -0.62
HSPG2P98160 CECR7-204ENST00000609932 568 ntTSL 2 BASIC11.19□□□□□ -0.62
HSPG2P98160 AL589182.2-201ENST00000619332 1049 ntBASIC11.19□□□□□ -0.62
HSPG2P98160 AC025048.6-201ENST00000634326 1161 ntBASIC11.19□□□□□ -0.62
HSPG2P98160 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC11.19□□□□□ -0.62
HSPG2P98160 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
HSPG2P98160 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC11.19□□□□□ -0.62
HSPG2P98160 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
HSPG2P98160 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
HSPG2P98160 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
HSPG2P98160 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
HSPG2P98160 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC11.19□□□□□ -0.62
HSPG2P98160 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC11.19□□□□□ -0.62
HSPG2P98160 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC11.19□□□□□ -0.62
HSPG2P98160 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC11.19□□□□□ -0.62
HSPG2P98160 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
HSPG2P98160 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
HSPG2P98160 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
HSPG2P98160 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC11.19□□□□□ -0.62
HSPG2P98160 COQ9-214ENST00000567933 882 ntTSL 3 BASIC11.19□□□□□ -0.62
HSPG2P98160 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
HSPG2P98160 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
HSPG2P98160 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
HSPG2P98160 AL024508.2-201ENST00000607749 1894 ntBASIC11.19□□□□□ -0.62
HSPG2P98160 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
HSPG2P98160 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC11.19□□□□□ -0.62
HSPG2P98160 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
HSPG2P98160 MIR943-201ENST00000401286 94 ntBASIC11.19□□□□□ -0.62
HSPG2P98160 SPDYE21P-201ENST00000413323 827 ntBASIC11.19□□□□□ -0.62
HSPG2P98160 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC11.19□□□□□ -0.62
HSPG2P98160 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
HSPG2P98160 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC11.19□□□□□ -0.62
HSPG2P98160 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
HSPG2P98160 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC11.18□□□□□ -0.62
HSPG2P98160 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
HSPG2P98160 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
HSPG2P98160 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
HSPG2P98160 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
HSPG2P98160 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC11.18□□□□□ -0.62
HSPG2P98160 MTCL1P1-201ENST00000446207 792 ntBASIC11.18□□□□□ -0.62
HSPG2P98160 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC11.18□□□□□ -0.62
HSPG2P98160 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
HSPG2P98160 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC11.18□□□□□ -0.62
HSPG2P98160 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC11.18□□□□□ -0.62
HSPG2P98160 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC11.18□□□□□ -0.62
HSPG2P98160 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC11.18□□□□□ -0.62
HSPG2P98160 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC11.18□□□□□ -0.62
HSPG2P98160 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
HSPG2P98160 AC099778.1-201ENST00000568593 1911 ntBASIC11.18□□□□□ -0.62
HSPG2P98160 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
HSPG2P98160 LBX2-AS1-202ENST00000603175 2083 ntBASIC11.18□□□□□ -0.62
HSPG2P98160 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
HSPG2P98160 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC11.18□□□□□ -0.62
HSPG2P98160 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
HSPG2P98160 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
HSPG2P98160 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
HSPG2P98160 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
HSPG2P98160 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
HSPG2P98160 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC11.18□□□□□ -0.62
HSPG2P98160 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
HSPG2P98160 FAM207CP-201ENST00000443486 507 ntBASIC11.18□□□□□ -0.62
HSPG2P98160 AC112698.1-201ENST00000510299 916 ntBASIC11.18□□□□□ -0.62
HSPG2P98160 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC11.18□□□□□ -0.62
HSPG2P98160 AL132655.2-201ENST00000596276 594 ntBASIC11.18□□□□□ -0.62
HSPG2P98160 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC11.18□□□□□ -0.62
HSPG2P98160 AC004877.2-201ENST00000623941 599 ntBASIC11.18□□□□□ -0.62
HSPG2P98160 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
HSPG2P98160 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC11.18□□□□□ -0.62
HSPG2P98160 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
HSPG2P98160 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
HSPG2P98160 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC11.18□□□□□ -0.62
HSPG2P98160 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
HSPG2P98160 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC11.18□□□□□ -0.62
HSPG2P98160 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
HSPG2P98160 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC11.18□□□□□ -0.62
HSPG2P98160 ASL-204ENST00000395331 1538 ntTSL 5 BASIC11.18□□□□□ -0.62
HSPG2P98160 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC11.18□□□□□ -0.62
HSPG2P98160 AC096734.2-201ENST00000562054 433 ntBASIC11.18□□□□□ -0.62
HSPG2P98160 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC11.18□□□□□ -0.62
HSPG2P98160 AD001527.2-201ENST00000622994 785 ntBASIC11.18□□□□□ -0.62
HSPG2P98160 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
HSPG2P98160 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC11.17□□□□□ -0.62
HSPG2P98160 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
HSPG2P98160 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC11.17□□□□□ -0.62
HSPG2P98160 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC11.17□□□□□ -0.62
HSPG2P98160 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
HSPG2P98160 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC11.17□□□□□ -0.62
HSPG2P98160 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC11.17□□□□□ -0.62
HSPG2P98160 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC11.17□□□□□ -0.62
HSPG2P98160 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC11.17□□□□□ -0.62
HSPG2P98160 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC11.17□□□□□ -0.62
HSPG2P98160 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
HSPG2P98160 AC112907.3-201ENST00000577781 2400 ntBASIC11.17□□□□□ -0.62
HSPG2P98160 LINC00565-201ENST00000562710 2331 ntBASIC11.17□□□□□ -0.62
HSPG2P98160 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
HSPG2P98160 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC11.17□□□□□ -0.62
HSPG2P98160 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC11.17□□□□□ -0.62
HSPG2P98160 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC11.17□□□□□ -0.62
HSPG2P98160 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC11.17□□□□□ -0.62
HSPG2P98160 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms