Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST1H3AP68431 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.9■□□□□ 0.14
HIST1H3AP68431 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.9■□□□□ 0.14
HIST1H3AP68431 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST1H3AP68431 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
HIST1H3AP68431 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.9■□□□□ 0.14
HIST1H3AP68431 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST1H3AP68431 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST1H3AP68431 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HIST1H3AP68431 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST1H3AP68431 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.9■□□□□ 0.14
HIST1H3AP68431 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.9■□□□□ 0.14
HIST1H3AP68431 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST1H3AP68431 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST1H3AP68431 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST1H3AP68431 TERF1P1-201ENST00000311003 1181 ntBASIC15.9■□□□□ 0.14
HIST1H3AP68431 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST1H3AP68431 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST1H3AP68431 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST1H3AP68431 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST1H3AP68431 LIN28AP1-201ENST00000429574 405 ntBASIC15.9■□□□□ 0.14
HIST1H3AP68431 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST1H3AP68431 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST1H3AP68431 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15.9■□□□□ 0.14
HIST1H3AP68431 AC034232.1-201ENST00000506026 1064 ntBASIC15.9■□□□□ 0.14
HIST1H3AP68431 DUTP2-201ENST00000519164 463 ntBASIC15.9■□□□□ 0.14
HIST1H3AP68431 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
HIST1H3AP68431 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
HIST1H3AP68431 AC005363.2-201ENST00000618631 242 ntBASIC15.9■□□□□ 0.14
HIST1H3AP68431 AL023973.1-201ENST00000624619 620 ntBASIC15.9■□□□□ 0.14
HIST1H3AP68431 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST1H3AP68431 PODN-203ENST00000395871 2744 ntTSL 5 BASIC15.9■□□□□ 0.14
HIST1H3AP68431 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST1H3AP68431 AC020763.4-201ENST00000623414 4170 ntBASIC15.9■□□□□ 0.14
HIST1H3AP68431 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
HIST1H3AP68431 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST1H3AP68431 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.9■□□□□ 0.14
HIST1H3AP68431 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.9■□□□□ 0.14
HIST1H3AP68431 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HIST1H3AP68431 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST1H3AP68431 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST1H3AP68431 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST1H3AP68431 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HIST1H3AP68431 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST1H3AP68431 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.14
HIST1H3AP68431 AP000997.3-201ENST00000623333 2250 ntBASIC15.89■□□□□ 0.13
HIST1H3AP68431 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
HIST1H3AP68431 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.89■□□□□ 0.13
HIST1H3AP68431 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.89■□□□□ 0.13
HIST1H3AP68431 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HIST1H3AP68431 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HIST1H3AP68431 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HIST1H3AP68431 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
HIST1H3AP68431 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.89■□□□□ 0.13
HIST1H3AP68431 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HIST1H3AP68431 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HIST1H3AP68431 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HIST1H3AP68431 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HIST1H3AP68431 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
HIST1H3AP68431 BX664615.1-201ENST00000443558 458 ntBASIC15.89■□□□□ 0.13
HIST1H3AP68431 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.89■□□□□ 0.13
HIST1H3AP68431 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.89■□□□□ 0.13
HIST1H3AP68431 AL441883.1-201ENST00000566170 1045 ntBASIC15.89■□□□□ 0.13
HIST1H3AP68431 P4HB-223ENST00000576390 439 ntTSL 4 BASIC15.89■□□□□ 0.13
HIST1H3AP68431 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.89■□□□□ 0.13
HIST1H3AP68431 AC140113.3-201ENST00000605663 199 ntBASIC15.89■□□□□ 0.13
HIST1H3AP68431 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC15.89■□□□□ 0.13
HIST1H3AP68431 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HIST1H3AP68431 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.89■□□□□ 0.13
HIST1H3AP68431 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
HIST1H3AP68431 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HIST1H3AP68431 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
HIST1H3AP68431 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HIST1H3AP68431 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
HIST1H3AP68431 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
HIST1H3AP68431 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HIST1H3AP68431 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HIST1H3AP68431 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
HIST1H3AP68431 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HIST1H3AP68431 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
HIST1H3AP68431 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
HIST1H3AP68431 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
HIST1H3AP68431 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HIST1H3AP68431 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HIST1H3AP68431 AL133373.2-201ENST00000623187 2828 ntBASIC15.88■□□□□ 0.13
HIST1H3AP68431 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HIST1H3AP68431 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.88■□□□□ 0.13
HIST1H3AP68431 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.88■□□□□ 0.13
HIST1H3AP68431 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HIST1H3AP68431 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.88■□□□□ 0.13
HIST1H3AP68431 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
HIST1H3AP68431 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HIST1H3AP68431 AL137013.1-201ENST00000432946 1228 ntBASIC15.88■□□□□ 0.13
HIST1H3AP68431 ATP5G1P1-201ENST00000448724 379 ntBASIC15.88■□□□□ 0.13
HIST1H3AP68431 RASA4DP-201ENST00000460726 1199 ntBASIC15.88■□□□□ 0.13
HIST1H3AP68431 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HIST1H3AP68431 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
HIST1H3AP68431 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.88■□□□□ 0.13
HIST1H3AP68431 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HIST1H3AP68431 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms