Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PDE1AP54750 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PDE1AP54750 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
PDE1AP54750 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
PDE1AP54750 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PDE1AP54750 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
PDE1AP54750 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC22.22■■□□□ 1.15
PDE1AP54750 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC22.22■■□□□ 1.15
PDE1AP54750 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PDE1AP54750 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC22.21■■□□□ 1.15
PDE1AP54750 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
PDE1AP54750 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC22.21■■□□□ 1.15
PDE1AP54750 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC22.21■■□□□ 1.15
PDE1AP54750 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
PDE1AP54750 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PDE1AP54750 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PDE1AP54750 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
PDE1AP54750 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PDE1AP54750 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PDE1AP54750 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PDE1AP54750 DUTP2-201ENST00000519164 463 ntBASIC22.21■■□□□ 1.15
PDE1AP54750 AC024563.2-201ENST00000603282 481 ntBASIC22.21■■□□□ 1.15
PDE1AP54750 HYMAI.1-201ENST00000620949 238 ntBASIC22.21■■□□□ 1.15
PDE1AP54750 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC22.21■■□□□ 1.15
PDE1AP54750 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC22.21■■□□□ 1.15
PDE1AP54750 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PDE1AP54750 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
PDE1AP54750 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PDE1AP54750 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PDE1AP54750 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
PDE1AP54750 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
PDE1AP54750 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC22.2■■□□□ 1.15
PDE1AP54750 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PDE1AP54750 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PDE1AP54750 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC22.2■■□□□ 1.14
PDE1AP54750 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PDE1AP54750 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC22.2■■□□□ 1.14
PDE1AP54750 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PDE1AP54750 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PDE1AP54750 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
PDE1AP54750 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PDE1AP54750 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PDE1AP54750 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
PDE1AP54750 AL359075.1-203ENST00000462729 1002 ntBASIC22.2■■□□□ 1.14
PDE1AP54750 AC113404.2-201ENST00000507884 177 ntBASIC22.2■■□□□ 1.14
PDE1AP54750 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC22.2■■□□□ 1.14
PDE1AP54750 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC22.2■■□□□ 1.14
PDE1AP54750 TEN1-204ENST00000588202 862 ntTSL 3 BASIC22.2■■□□□ 1.14
PDE1AP54750 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
PDE1AP54750 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
PDE1AP54750 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PDE1AP54750 KRT89P-201ENST00000620027 1478 ntBASIC22.2■■□□□ 1.14
PDE1AP54750 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PDE1AP54750 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC22.2■■□□□ 1.14
PDE1AP54750 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC22.2■■□□□ 1.14
PDE1AP54750 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PDE1AP54750 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC22.19■■□□□ 1.14
PDE1AP54750 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PDE1AP54750 LINC00602-201ENST00000629776 2065 ntBASIC22.19■■□□□ 1.14
PDE1AP54750 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
PDE1AP54750 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
PDE1AP54750 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC22.19■■□□□ 1.14
PDE1AP54750 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PDE1AP54750 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PDE1AP54750 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PDE1AP54750 HOMER2P1-201ENST00000455653 964 ntBASIC22.19■■□□□ 1.14
PDE1AP54750 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC22.19■■□□□ 1.14
PDE1AP54750 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC22.19■■□□□ 1.14
PDE1AP54750 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC22.19■■□□□ 1.14
PDE1AP54750 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC22.19■■□□□ 1.14
PDE1AP54750 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC22.19■■□□□ 1.14
PDE1AP54750 AC008687.5-201ENST00000593746 558 ntBASIC22.19■■□□□ 1.14
PDE1AP54750 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC22.19■■□□□ 1.14
PDE1AP54750 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PDE1AP54750 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PDE1AP54750 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PDE1AP54750 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PDE1AP54750 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
PDE1AP54750 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PDE1AP54750 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PDE1AP54750 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
PDE1AP54750 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PDE1AP54750 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PDE1AP54750 AC134043.2-201ENST00000624206 2238 ntBASIC22.18■■□□□ 1.14
PDE1AP54750 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PDE1AP54750 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC22.18■■□□□ 1.14
PDE1AP54750 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC22.18■■□□□ 1.14
PDE1AP54750 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PDE1AP54750 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PDE1AP54750 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PDE1AP54750 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PDE1AP54750 KRT18P55-202ENST00000578578 1546 ntBASIC22.18■■□□□ 1.14
PDE1AP54750 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PDE1AP54750 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PDE1AP54750 HBZP1-201ENST00000354915 429 ntBASIC22.18■■□□□ 1.14
PDE1AP54750 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
PDE1AP54750 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC22.18■■□□□ 1.14
PDE1AP54750 AC063952.2-201ENST00000498792 1227 ntBASIC22.18■■□□□ 1.14
PDE1AP54750 MNT-208ENST00000575394 606 ntTSL 4 BASIC22.18■■□□□ 1.14
PDE1AP54750 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms