Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
LIMK2P53671 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.35■□□□□ 0.53
LIMK2P53671 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LIMK2P53671 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LIMK2P53671 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LIMK2P53671 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LIMK2P53671 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LIMK2P53671 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.35■□□□□ 0.53
LIMK2P53671 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.35■□□□□ 0.53
LIMK2P53671 HOMER2P1-201ENST00000455653 964 ntBASIC18.35■□□□□ 0.53
LIMK2P53671 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.35■□□□□ 0.53
LIMK2P53671 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.35■□□□□ 0.53
LIMK2P53671 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.35■□□□□ 0.53
LIMK2P53671 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LIMK2P53671 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.35■□□□□ 0.53
LIMK2P53671 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
LIMK2P53671 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LIMK2P53671 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LIMK2P53671 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.35■□□□□ 0.53
LIMK2P53671 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.35■□□□□ 0.53
LIMK2P53671 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LIMK2P53671 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
LIMK2P53671 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LIMK2P53671 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LIMK2P53671 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LIMK2P53671 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LIMK2P53671 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.35■□□□□ 0.53
LIMK2P53671 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.35■□□□□ 0.53
LIMK2P53671 PHGDH-209ENST00000641074 1780 ntBASIC18.35■□□□□ 0.53
LIMK2P53671 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
LIMK2P53671 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.35■□□□□ 0.53
LIMK2P53671 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LIMK2P53671 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.34■□□□□ 0.53
LIMK2P53671 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LIMK2P53671 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LIMK2P53671 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.34■□□□□ 0.53
LIMK2P53671 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LIMK2P53671 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LIMK2P53671 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LIMK2P53671 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.34■□□□□ 0.53
LIMK2P53671 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LIMK2P53671 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.34■□□□□ 0.53
LIMK2P53671 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LIMK2P53671 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.34■□□□□ 0.53
LIMK2P53671 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.34■□□□□ 0.53
LIMK2P53671 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
LIMK2P53671 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LIMK2P53671 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LIMK2P53671 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LIMK2P53671 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LIMK2P53671 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LIMK2P53671 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.34■□□□□ 0.53
LIMK2P53671 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LIMK2P53671 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LIMK2P53671 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
LIMK2P53671 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.33■□□□□ 0.53
LIMK2P53671 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LIMK2P53671 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LIMK2P53671 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LIMK2P53671 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
LIMK2P53671 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
LIMK2P53671 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LIMK2P53671 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.33■□□□□ 0.53
LIMK2P53671 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
LIMK2P53671 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.33■□□□□ 0.53
LIMK2P53671 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LIMK2P53671 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LIMK2P53671 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LIMK2P53671 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
LIMK2P53671 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.33■□□□□ 0.52
LIMK2P53671 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.33■□□□□ 0.52
LIMK2P53671 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.33■□□□□ 0.52
LIMK2P53671 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LIMK2P53671 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.33■□□□□ 0.52
LIMK2P53671 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.33■□□□□ 0.52
LIMK2P53671 AL441883.1-201ENST00000566170 1045 ntBASIC18.33■□□□□ 0.52
LIMK2P53671 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LIMK2P53671 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.33■□□□□ 0.52
LIMK2P53671 AL023973.1-201ENST00000624619 620 ntBASIC18.33■□□□□ 0.52
LIMK2P53671 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LIMK2P53671 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LIMK2P53671 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LIMK2P53671 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
LIMK2P53671 SDHAP2-201ENST00000455183 2001 ntBASIC18.33■□□□□ 0.52
LIMK2P53671 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LIMK2P53671 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LIMK2P53671 AC036111.1-201ENST00000533973 1582 ntBASIC18.33■□□□□ 0.52
LIMK2P53671 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LIMK2P53671 AL163051.1-201ENST00000569214 1512 ntBASIC18.33■□□□□ 0.52
LIMK2P53671 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LIMK2P53671 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LIMK2P53671 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LIMK2P53671 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LIMK2P53671 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
LIMK2P53671 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LIMK2P53671 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LIMK2P53671 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.32■□□□□ 0.52
LIMK2P53671 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LIMK2P53671 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LIMK2P53671 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms