Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC20.42■□□□□ 0.86
LBX1P52954 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LBX1P52954 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LBX1P52954 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.42■□□□□ 0.86
LBX1P52954 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LBX1P52954 CYP51A1P2-201ENST00000419457 1499 ntBASIC20.42■□□□□ 0.86
LBX1P52954 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC20.42■□□□□ 0.86
LBX1P52954 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.42■□□□□ 0.86
LBX1P52954 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
LBX1P52954 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LBX1P52954 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.41■□□□□ 0.86
LBX1P52954 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
LBX1P52954 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LBX1P52954 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LBX1P52954 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LBX1P52954 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LBX1P52954 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
LBX1P52954 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC20.41■□□□□ 0.86
LBX1P52954 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.41■□□□□ 0.86
LBX1P52954 TREML5P-201ENST00000421694 576 ntBASIC20.41■□□□□ 0.86
LBX1P52954 AC005237.2-201ENST00000434368 219 ntBASIC20.41■□□□□ 0.86
LBX1P52954 GALT-202ENST00000450095 1280 ntTSL 2 BASIC20.41■□□□□ 0.86
LBX1P52954 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.41■□□□□ 0.86
LBX1P52954 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC20.41■□□□□ 0.86
LBX1P52954 HILS1-202ENST00000545329 423 ntBASIC20.41■□□□□ 0.86
LBX1P52954 CIPC-205ENST00000555437 566 ntTSL 3 BASIC20.41■□□□□ 0.86
LBX1P52954 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC20.41■□□□□ 0.86
LBX1P52954 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC20.41■□□□□ 0.86
LBX1P52954 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC20.41■□□□□ 0.86
LBX1P52954 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC20.41■□□□□ 0.86
LBX1P52954 AC116407.2-201ENST00000613639 860 ntBASIC20.41■□□□□ 0.86
LBX1P52954 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.41■□□□□ 0.86
LBX1P52954 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.41■□□□□ 0.86
LBX1P52954 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LBX1P52954 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.41■□□□□ 0.86
LBX1P52954 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LBX1P52954 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LBX1P52954 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
LBX1P52954 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LBX1P52954 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LBX1P52954 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LBX1P52954 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
LBX1P52954 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC20.4■□□□□ 0.86
LBX1P52954 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.4■□□□□ 0.86
LBX1P52954 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
LBX1P52954 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.4■□□□□ 0.86
LBX1P52954 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.4■□□□□ 0.86
LBX1P52954 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
LBX1P52954 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
LBX1P52954 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC20.4■□□□□ 0.86
LBX1P52954 AC007967.3-201ENST00000434308 558 ntBASIC20.4■□□□□ 0.86
LBX1P52954 RPS2P32-201ENST00000439199 892 ntBASIC20.4■□□□□ 0.86
LBX1P52954 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC20.4■□□□□ 0.86
LBX1P52954 COQ9-214ENST00000567933 882 ntTSL 3 BASIC20.4■□□□□ 0.86
LBX1P52954 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC20.4■□□□□ 0.86
LBX1P52954 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
LBX1P52954 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LBX1P52954 Z82202.1-201ENST00000623446 1880 ntBASIC20.4■□□□□ 0.86
LBX1P52954 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.4■□□□□ 0.86
LBX1P52954 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.86
LBX1P52954 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
LBX1P52954 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
LBX1P52954 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
LBX1P52954 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LBX1P52954 TEX21P-204ENST00000641479 1693 ntBASIC20.39■□□□□ 0.86
LBX1P52954 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC20.39■□□□□ 0.85
LBX1P52954 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LBX1P52954 PIN1P1-201ENST00000412108 996 ntBASIC20.39■□□□□ 0.85
LBX1P52954 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC20.39■□□□□ 0.85
LBX1P52954 AC125807.1-201ENST00000483097 614 ntBASIC20.39■□□□□ 0.85
LBX1P52954 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC20.39■□□□□ 0.85
LBX1P52954 GATB-205ENST00000508611 605 ntTSL 2 BASIC20.39■□□□□ 0.85
LBX1P52954 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC20.39■□□□□ 0.85
LBX1P52954 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.39■□□□□ 0.85
LBX1P52954 AL132655.2-201ENST00000596276 594 ntBASIC20.39■□□□□ 0.85
LBX1P52954 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LBX1P52954 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LBX1P52954 AC068587.9-201ENST00000641814 219 ntBASIC20.39■□□□□ 0.85
LBX1P52954 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LBX1P52954 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.39■□□□□ 0.85
LBX1P52954 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.39■□□□□ 0.85
LBX1P52954 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
LBX1P52954 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LBX1P52954 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.39■□□□□ 0.85
LBX1P52954 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
LBX1P52954 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LBX1P52954 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LBX1P52954 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.38■□□□□ 0.85
LBX1P52954 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.38■□□□□ 0.85
LBX1P52954 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LBX1P52954 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.38■□□□□ 0.85
LBX1P52954 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LBX1P52954 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
LBX1P52954 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LBX1P52954 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LBX1P52954 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.38■□□□□ 0.85
LBX1P52954 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
LBX1P52954 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.38■□□□□ 0.85
LBX1P52954 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
LBX1P52954 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms