Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 AC093827.2-201ENST00000512654 315 ntBASIC17.11■□□□□ 0.33
CLK1P49759 SLC25A1P4-201ENST00000567977 778 ntBASIC17.11■□□□□ 0.33
CLK1P49759 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.11■□□□□ 0.33
CLK1P49759 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
CLK1P49759 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLK1P49759 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLK1P49759 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.11■□□□□ 0.33
CLK1P49759 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
CLK1P49759 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLK1P49759 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLK1P49759 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLK1P49759 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLK1P49759 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.11■□□□□ 0.33
CLK1P49759 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLK1P49759 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLK1P49759 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLK1P49759 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CLK1P49759 LINC00896-202ENST00000609602 2128 ntBASIC17.11■□□□□ 0.33
CLK1P49759 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.11■□□□□ 0.33
CLK1P49759 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
CLK1P49759 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CLK1P49759 AL162741.1-201ENST00000565563 1558 ntBASIC17.11■□□□□ 0.33
CLK1P49759 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CLK1P49759 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.1■□□□□ 0.33
CLK1P49759 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.1■□□□□ 0.33
CLK1P49759 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLK1P49759 SIRPAP1-201ENST00000448467 1770 ntBASIC17.1■□□□□ 0.33
CLK1P49759 AC073592.3-201ENST00000625118 1834 ntBASIC17.1■□□□□ 0.33
CLK1P49759 GNAS-203ENST00000306120 1878 ntBASIC17.1■□□□□ 0.33
CLK1P49759 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLK1P49759 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLK1P49759 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLK1P49759 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.1■□□□□ 0.33
CLK1P49759 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLK1P49759 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLK1P49759 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.1■□□□□ 0.33
CLK1P49759 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.1■□□□□ 0.33
CLK1P49759 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.1■□□□□ 0.33
CLK1P49759 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.1■□□□□ 0.33
CLK1P49759 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLK1P49759 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.1■□□□□ 0.33
CLK1P49759 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CLK1P49759 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLK1P49759 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CLK1P49759 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CLK1P49759 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLK1P49759 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLK1P49759 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CLK1P49759 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
CLK1P49759 KRT8P3-201ENST00000519669 1449 ntBASIC17.1■□□□□ 0.33
CLK1P49759 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLK1P49759 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLK1P49759 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.1■□□□□ 0.33
CLK1P49759 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLK1P49759 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLK1P49759 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLK1P49759 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLK1P49759 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLK1P49759 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CLK1P49759 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLK1P49759 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLK1P49759 AC126763.1-201ENST00000552015 2118 ntBASIC17.09■□□□□ 0.33
CLK1P49759 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CLK1P49759 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLK1P49759 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLK1P49759 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CLK1P49759 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.09■□□□□ 0.33
CLK1P49759 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
CLK1P49759 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLK1P49759 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLK1P49759 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.09■□□□□ 0.33
CLK1P49759 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLK1P49759 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLK1P49759 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CLK1P49759 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLK1P49759 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CLK1P49759 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.09■□□□□ 0.33
CLK1P49759 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLK1P49759 MFAP1P1-201ENST00000442257 1255 ntBASIC17.09■□□□□ 0.33
CLK1P49759 RBM17P1-201ENST00000453646 1190 ntBASIC17.09■□□□□ 0.33
CLK1P49759 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CLK1P49759 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.09■□□□□ 0.33
CLK1P49759 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.09■□□□□ 0.33
CLK1P49759 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.09■□□□□ 0.33
CLK1P49759 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.09■□□□□ 0.33
CLK1P49759 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLK1P49759 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.09■□□□□ 0.33
CLK1P49759 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLK1P49759 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CLK1P49759 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLK1P49759 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLK1P49759 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CLK1P49759 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.09■□□□□ 0.33
CLK1P49759 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLK1P49759 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLK1P49759 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.09■□□□□ 0.33
CLK1P49759 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.09■□□□□ 0.33
CLK1P49759 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLK1P49759 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLK1P49759 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms