Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.3■□□□□ 0.68
BRCC3P46736 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
BRCC3P46736 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
BRCC3P46736 RCN1P2-201ENST00000398357 915 ntBASIC19.3■□□□□ 0.68
BRCC3P46736 KRT18P65-201ENST00000439811 1286 ntBASIC19.3■□□□□ 0.68
BRCC3P46736 AF238378.1-201ENST00000526806 358 ntBASIC19.3■□□□□ 0.68
BRCC3P46736 AL160237.2-201ENST00000556165 472 ntBASIC19.3■□□□□ 0.68
BRCC3P46736 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.3■□□□□ 0.68
BRCC3P46736 AL591684.3-201ENST00000605187 298 ntBASIC19.3■□□□□ 0.68
BRCC3P46736 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
BRCC3P46736 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
BRCC3P46736 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.3■□□□□ 0.68
BRCC3P46736 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
BRCC3P46736 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
BRCC3P46736 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BRCC3P46736 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
BRCC3P46736 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
BRCC3P46736 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.3■□□□□ 0.68
BRCC3P46736 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
BRCC3P46736 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.3■□□□□ 0.68
BRCC3P46736 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.29■□□□□ 0.68
BRCC3P46736 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BRCC3P46736 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BRCC3P46736 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BRCC3P46736 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.29■□□□□ 0.68
BRCC3P46736 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
BRCC3P46736 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BRCC3P46736 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BRCC3P46736 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BRCC3P46736 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BRCC3P46736 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BRCC3P46736 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BRCC3P46736 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.29■□□□□ 0.68
BRCC3P46736 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.29■□□□□ 0.68
BRCC3P46736 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.29■□□□□ 0.68
BRCC3P46736 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.29■□□□□ 0.68
BRCC3P46736 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BRCC3P46736 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.29■□□□□ 0.68
BRCC3P46736 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
BRCC3P46736 AL121912.1-201ENST00000603683 238 ntBASIC19.29■□□□□ 0.68
BRCC3P46736 AC114341.1-201ENST00000618070 349 ntBASIC19.29■□□□□ 0.68
BRCC3P46736 REXO1L6P-202ENST00000619970 1078 ntBASIC19.29■□□□□ 0.68
BRCC3P46736 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
BRCC3P46736 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
BRCC3P46736 AC132938.6-201ENST00000623828 1655 ntBASIC19.29■□□□□ 0.68
BRCC3P46736 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
BRCC3P46736 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BRCC3P46736 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
BRCC3P46736 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
BRCC3P46736 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
BRCC3P46736 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BRCC3P46736 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BRCC3P46736 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRCC3P46736 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRCC3P46736 TP73-AS1-210ENST00000637775 1455 ntBASIC19.28■□□□□ 0.68
BRCC3P46736 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.28■□□□□ 0.68
BRCC3P46736 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
BRCC3P46736 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
BRCC3P46736 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.28■□□□□ 0.68
BRCC3P46736 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.28■□□□□ 0.68
BRCC3P46736 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BRCC3P46736 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRCC3P46736 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
BRCC3P46736 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRCC3P46736 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
BRCC3P46736 AP002469.2-201ENST00000531724 424 ntBASIC19.28■□□□□ 0.68
BRCC3P46736 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.28■□□□□ 0.68
BRCC3P46736 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.28■□□□□ 0.68
BRCC3P46736 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BRCC3P46736 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BRCC3P46736 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRCC3P46736 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
BRCC3P46736 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRCC3P46736 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRCC3P46736 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRCC3P46736 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BRCC3P46736 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRCC3P46736 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.27■□□□□ 0.68
BRCC3P46736 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BRCC3P46736 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.27■□□□□ 0.68
BRCC3P46736 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
BRCC3P46736 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRCC3P46736 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRCC3P46736 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRCC3P46736 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRCC3P46736 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BRCC3P46736 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRCC3P46736 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.27■□□□□ 0.68
BRCC3P46736 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRCC3P46736 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.27■□□□□ 0.68
BRCC3P46736 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRCC3P46736 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.27■□□□□ 0.68
BRCC3P46736 SAPCD2P3-201ENST00000455031 850 ntBASIC19.27■□□□□ 0.68
BRCC3P46736 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.27■□□□□ 0.68
BRCC3P46736 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRCC3P46736 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.27■□□□□ 0.68
BRCC3P46736 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.27■□□□□ 0.68
BRCC3P46736 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
BRCC3P46736 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.27■□□□□ 0.68
BRCC3P46736 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms