Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.92■□□□□ 0.62
MMP13P45452 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
MMP13P45452 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.92■□□□□ 0.62
MMP13P45452 AL137013.1-201ENST00000432946 1228 ntBASIC18.92■□□□□ 0.62
MMP13P45452 ATP5G1P1-201ENST00000448724 379 ntBASIC18.92■□□□□ 0.62
MMP13P45452 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.92■□□□□ 0.62
MMP13P45452 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MMP13P45452 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MMP13P45452 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
MMP13P45452 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MMP13P45452 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.91■□□□□ 0.62
MMP13P45452 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP13P45452 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.91■□□□□ 0.62
MMP13P45452 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MMP13P45452 AC093677.2-201ENST00000600169 1863 ntBASIC18.91■□□□□ 0.62
MMP13P45452 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP13P45452 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP13P45452 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.91■□□□□ 0.62
MMP13P45452 TERF1P1-201ENST00000311003 1181 ntBASIC18.91■□□□□ 0.62
MMP13P45452 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP13P45452 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.91■□□□□ 0.62
MMP13P45452 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP13P45452 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP13P45452 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP13P45452 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP13P45452 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MMP13P45452 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.91■□□□□ 0.62
MMP13P45452 KRT18P23-201ENST00000435622 1283 ntBASIC18.91■□□□□ 0.62
MMP13P45452 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP13P45452 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP13P45452 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.91■□□□□ 0.62
MMP13P45452 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.91■□□□□ 0.62
MMP13P45452 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
MMP13P45452 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.91■□□□□ 0.62
MMP13P45452 AL138966.2-201ENST00000621997 464 ntBASIC18.91■□□□□ 0.62
MMP13P45452 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
MMP13P45452 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
MMP13P45452 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.91■□□□□ 0.62
MMP13P45452 AC141257.4-201ENST00000634557 245 ntBASIC18.91■□□□□ 0.62
MMP13P45452 AC136944.6-201ENST00000634818 245 ntBASIC18.91■□□□□ 0.62
MMP13P45452 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
MMP13P45452 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP13P45452 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP13P45452 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.91■□□□□ 0.62
MMP13P45452 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
MMP13P45452 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
MMP13P45452 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MMP13P45452 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MMP13P45452 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP13P45452 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP13P45452 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP13P45452 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP13P45452 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.91■□□□□ 0.62
MMP13P45452 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP13P45452 KRT8P7-201ENST00000533003 1432 ntBASIC18.91■□□□□ 0.62
MMP13P45452 HOXB1-202ENST00000577092 1414 ntBASIC18.91■□□□□ 0.62
MMP13P45452 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
MMP13P45452 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP13P45452 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
MMP13P45452 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
MMP13P45452 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MMP13P45452 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MMP13P45452 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MMP13P45452 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
MMP13P45452 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MMP13P45452 AP000593.1-201ENST00000393668 712 ntBASIC18.9■□□□□ 0.62
MMP13P45452 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.9■□□□□ 0.62
MMP13P45452 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MMP13P45452 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MMP13P45452 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MMP13P45452 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
MMP13P45452 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.9■□□□□ 0.62
MMP13P45452 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
MMP13P45452 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
MMP13P45452 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.9■□□□□ 0.62
MMP13P45452 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MMP13P45452 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MMP13P45452 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MMP13P45452 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
MMP13P45452 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
MMP13P45452 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.89■□□□□ 0.62
MMP13P45452 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
MMP13P45452 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
MMP13P45452 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
MMP13P45452 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
MMP13P45452 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MMP13P45452 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MMP13P45452 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MMP13P45452 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MMP13P45452 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MMP13P45452 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
MMP13P45452 AC005521.1-201ENST00000393351 872 ntBASIC18.89■□□□□ 0.61
MMP13P45452 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.89■□□□□ 0.61
MMP13P45452 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.89■□□□□ 0.61
MMP13P45452 NEK4P2-201ENST00000580004 1012 ntBASIC18.89■□□□□ 0.61
MMP13P45452 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.89■□□□□ 0.61
MMP13P45452 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
MMP13P45452 AC112497.1-201ENST00000624824 639 ntBASIC18.89■□□□□ 0.61
MMP13P45452 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MMP13P45452 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms