Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MTHFRP42898 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MTHFRP42898 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
MTHFRP42898 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.99■□□□□ 0.63
MTHFRP42898 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MTHFRP42898 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MTHFRP42898 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.99■□□□□ 0.63
MTHFRP42898 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MTHFRP42898 UPF3AP3-201ENST00000420996 769 ntBASIC18.99■□□□□ 0.63
MTHFRP42898 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.99■□□□□ 0.63
MTHFRP42898 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.99■□□□□ 0.63
MTHFRP42898 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.99■□□□□ 0.63
MTHFRP42898 AC021087.4-201ENST00000563761 564 ntBASIC18.99■□□□□ 0.63
MTHFRP42898 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.99■□□□□ 0.63
MTHFRP42898 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.99■□□□□ 0.63
MTHFRP42898 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MTHFRP42898 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.99■□□□□ 0.63
MTHFRP42898 AC140113.2-201ENST00000604370 208 ntBASIC18.99■□□□□ 0.63
MTHFRP42898 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.99■□□□□ 0.63
MTHFRP42898 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.99■□□□□ 0.63
MTHFRP42898 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.99■□□□□ 0.63
MTHFRP42898 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MTHFRP42898 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.99■□□□□ 0.63
MTHFRP42898 HLA-J-201ENST00000462773 1622 ntBASIC18.99■□□□□ 0.63
MTHFRP42898 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.99■□□□□ 0.63
MTHFRP42898 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
MTHFRP42898 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MTHFRP42898 AP005117.1-201ENST00000584346 1413 ntBASIC18.99■□□□□ 0.63
MTHFRP42898 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.99■□□□□ 0.63
MTHFRP42898 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MTHFRP42898 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MTHFRP42898 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MTHFRP42898 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.98■□□□□ 0.63
MTHFRP42898 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MTHFRP42898 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MTHFRP42898 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MTHFRP42898 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MTHFRP42898 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MTHFRP42898 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MTHFRP42898 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MTHFRP42898 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MTHFRP42898 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MTHFRP42898 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MTHFRP42898 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MTHFRP42898 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MTHFRP42898 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.98■□□□□ 0.63
MTHFRP42898 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
MTHFRP42898 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MTHFRP42898 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MTHFRP42898 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.98■□□□□ 0.63
MTHFRP42898 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.98■□□□□ 0.63
MTHFRP42898 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MTHFRP42898 AL356488.2-201ENST00000602755 427 ntBASIC18.98■□□□□ 0.63
MTHFRP42898 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
MTHFRP42898 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MTHFRP42898 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MTHFRP42898 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MTHFRP42898 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.98■□□□□ 0.63
MTHFRP42898 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MTHFRP42898 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MTHFRP42898 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MTHFRP42898 AP000974.1-201ENST00000623909 2387 ntBASIC18.98■□□□□ 0.63
MTHFRP42898 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MTHFRP42898 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
MTHFRP42898 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
MTHFRP42898 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.97■□□□□ 0.63
MTHFRP42898 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.97■□□□□ 0.63
MTHFRP42898 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MTHFRP42898 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.97■□□□□ 0.63
MTHFRP42898 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MTHFRP42898 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
MTHFRP42898 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
MTHFRP42898 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MTHFRP42898 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.97■□□□□ 0.63
MTHFRP42898 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.97■□□□□ 0.63
MTHFRP42898 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
MTHFRP42898 AC011467.2-201ENST00000598425 242 ntBASIC18.97■□□□□ 0.63
MTHFRP42898 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.97■□□□□ 0.63
MTHFRP42898 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.97■□□□□ 0.63
MTHFRP42898 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MTHFRP42898 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
MTHFRP42898 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MTHFRP42898 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MTHFRP42898 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.97■□□□□ 0.63
MTHFRP42898 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.97■□□□□ 0.63
MTHFRP42898 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.96■□□□□ 0.63
MTHFRP42898 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
MTHFRP42898 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MTHFRP42898 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.96■□□□□ 0.63
MTHFRP42898 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MTHFRP42898 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
MTHFRP42898 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MTHFRP42898 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
MTHFRP42898 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.96■□□□□ 0.63
MTHFRP42898 RPS2P1-201ENST00000434010 821 ntBASIC18.96■□□□□ 0.63
MTHFRP42898 AC098831.1-202ENST00000438821 336 ntBASIC18.96■□□□□ 0.63
MTHFRP42898 ABCD1P5-201ENST00000445663 754 ntBASIC18.96■□□□□ 0.63
MTHFRP42898 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.96■□□□□ 0.63
MTHFRP42898 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.96■□□□□ 0.63
MTHFRP42898 OR7E14P-202ENST00000530490 1290 ntBASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms