Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC19.43■□□□□ 0.7
HOXD11P31277 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.43■□□□□ 0.7
HOXD11P31277 LINC01304-203ENST00000453880 812 ntTSL 2 BASIC19.43■□□□□ 0.7
HOXD11P31277 AC015908.1-201ENST00000478739 476 ntBASIC19.43■□□□□ 0.7
HOXD11P31277 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC19.43■□□□□ 0.7
HOXD11P31277 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.43■□□□□ 0.7
HOXD11P31277 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.43■□□□□ 0.7
HOXD11P31277 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
HOXD11P31277 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.43■□□□□ 0.7
HOXD11P31277 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HOXD11P31277 AC011298.2-201ENST00000617989 482 ntBASIC19.43■□□□□ 0.7
HOXD11P31277 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.43■□□□□ 0.7
HOXD11P31277 IP6K2-211ENST00000432678 1309 ntTSL 2 BASIC19.43■□□□□ 0.7
HOXD11P31277 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXD11P31277 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.43■□□□□ 0.7
HOXD11P31277 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC19.43■□□□□ 0.7
HOXD11P31277 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.43■□□□□ 0.7
HOXD11P31277 MTCO1P22-201ENST00000604619 1360 ntBASIC19.43■□□□□ 0.7
HOXD11P31277 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXD11P31277 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXD11P31277 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
HOXD11P31277 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
HOXD11P31277 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD11P31277 LINC01763-201ENST00000425185 1547 ntTSL 3 BASIC19.42■□□□□ 0.7
HOXD11P31277 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.42■□□□□ 0.7
HOXD11P31277 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD11P31277 AMTN-201ENST00000339336 1037 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD11P31277 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.42■□□□□ 0.7
HOXD11P31277 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.42■□□□□ 0.7
HOXD11P31277 TAS2R15P-201ENST00000390674 928 ntBASIC19.42■□□□□ 0.7
HOXD11P31277 MIR940-201ENST00000401276 94 ntBASIC19.42■□□□□ 0.7
HOXD11P31277 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC19.42■□□□□ 0.7
HOXD11P31277 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC19.42■□□□□ 0.7
HOXD11P31277 AL390879.2-203ENST00000426943 1121 ntBASIC19.42■□□□□ 0.7
HOXD11P31277 TXNL1P1-201ENST00000429528 554 ntBASIC19.42■□□□□ 0.7
HOXD11P31277 AC004980.1-204ENST00000429707 299 ntBASIC19.42■□□□□ 0.7
HOXD11P31277 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC19.42■□□□□ 0.7
HOXD11P31277 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD11P31277 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.42■□□□□ 0.7
HOXD11P31277 AC073648.2-201ENST00000510116 352 ntBASIC19.42■□□□□ 0.7
HOXD11P31277 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC19.42■□□□□ 0.7
HOXD11P31277 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC19.42■□□□□ 0.7
HOXD11P31277 AC093510.2-201ENST00000562820 896 ntBASIC19.42■□□□□ 0.7
HOXD11P31277 AP005131.4-202ENST00000590468 570 ntTSL 4 BASIC19.42■□□□□ 0.7
HOXD11P31277 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC19.42■□□□□ 0.7
HOXD11P31277 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC19.42■□□□□ 0.7
HOXD11P31277 LINC00682-204ENST00000637677 931 ntTSL 5 BASIC19.42■□□□□ 0.7
HOXD11P31277 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.42■□□□□ 0.7
HOXD11P31277 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD11P31277 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD11P31277 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD11P31277 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD11P31277 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD11P31277 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD11P31277 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD11P31277 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.42■□□□□ 0.7
HOXD11P31277 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD11P31277 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.42■□□□□ 0.7
HOXD11P31277 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.42■□□□□ 0.7
HOXD11P31277 LINC01960-201ENST00000563759 1884 ntBASIC19.41■□□□□ 0.7
HOXD11P31277 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.41■□□□□ 0.7
HOXD11P31277 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
HOXD11P31277 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HOXD11P31277 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXD11P31277 AP000523.1-201ENST00000398242 1049 ntBASIC19.41■□□□□ 0.7
HOXD11P31277 AC016907.1-201ENST00000419483 435 ntBASIC19.41■□□□□ 0.7
HOXD11P31277 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC19.41■□□□□ 0.7
HOXD11P31277 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXD11P31277 MTCYBP12-201ENST00000440559 1134 ntBASIC19.41■□□□□ 0.7
HOXD11P31277 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC19.41■□□□□ 0.7
HOXD11P31277 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC19.41■□□□□ 0.7
HOXD11P31277 AGPAT5P1-201ENST00000455855 1019 ntBASIC19.41■□□□□ 0.7
HOXD11P31277 ATP5G1P3-201ENST00000463301 410 ntBASIC19.41■□□□□ 0.7
HOXD11P31277 QTRT2-215ENST00000493014 1046 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXD11P31277 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXD11P31277 FOSL1P1-201ENST00000511041 816 ntBASIC19.41■□□□□ 0.7
HOXD11P31277 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC19.41■□□□□ 0.7
HOXD11P31277 OR8K2P-201ENST00000524645 927 ntBASIC19.41■□□□□ 0.7
HOXD11P31277 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC19.41■□□□□ 0.7
HOXD11P31277 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXD11P31277 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.41■□□□□ 0.7
HOXD11P31277 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
HOXD11P31277 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC19.41■□□□□ 0.7
HOXD11P31277 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC19.41■□□□□ 0.7
HOXD11P31277 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC19.41■□□□□ 0.7
HOXD11P31277 SATB1-AS1-212ENST00000596152 610 ntTSL 5 BASIC19.41■□□□□ 0.7
HOXD11P31277 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
HOXD11P31277 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.41■□□□□ 0.7
HOXD11P31277 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXD11P31277 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXD11P31277 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC19.41■□□□□ 0.7
HOXD11P31277 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXD11P31277 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXD11P31277 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXD11P31277 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.41■□□□□ 0.7
HOXD11P31277 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXD11P31277 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD11P31277 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.4■□□□□ 0.7
HOXD11P31277 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD11P31277 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms