Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.39■□□□□ 0.21
HLA-DPB1P04440 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DPB1P04440 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DPB1P04440 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DPB1P04440 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.38■□□□□ 0.21
HLA-DPB1P04440 AL357033.4-201ENST00000617703 1807 ntBASIC16.38■□□□□ 0.21
HLA-DPB1P04440 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DPB1P04440 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DPB1P04440 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.38■□□□□ 0.21
HLA-DPB1P04440 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DPB1P04440 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
HLA-DPB1P04440 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.38■□□□□ 0.21
HLA-DPB1P04440 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
HLA-DPB1P04440 AC012618.2-201ENST00000428058 849 ntBASIC16.38■□□□□ 0.21
HLA-DPB1P04440 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DPB1P04440 Z85996.1-201ENST00000494644 937 ntBASIC16.38■□□□□ 0.21
HLA-DPB1P04440 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.38■□□□□ 0.21
HLA-DPB1P04440 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.38■□□□□ 0.21
HLA-DPB1P04440 AC113410.3-201ENST00000623366 203 ntBASIC16.38■□□□□ 0.21
HLA-DPB1P04440 AL049637.2-201ENST00000641778 930 ntBASIC16.38■□□□□ 0.21
HLA-DPB1P04440 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DPB1P04440 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.38■□□□□ 0.21
HLA-DPB1P04440 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DPB1P04440 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.38■□□□□ 0.21
HLA-DPB1P04440 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DPB1P04440 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
HLA-DPB1P04440 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
HLA-DPB1P04440 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DPB1P04440 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.38■□□□□ 0.21
HLA-DPB1P04440 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DPB1P04440 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DPB1P04440 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.37■□□□□ 0.21
HLA-DPB1P04440 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.37■□□□□ 0.21
HLA-DPB1P04440 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DPB1P04440 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DPB1P04440 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DPB1P04440 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DPB1P04440 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DPB1P04440 OR6D1P-203ENST00000641209 4860 ntBASIC16.37■□□□□ 0.21
HLA-DPB1P04440 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DPB1P04440 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DPB1P04440 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.37■□□□□ 0.21
HLA-DPB1P04440 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DPB1P04440 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DPB1P04440 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DPB1P04440 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DPB1P04440 AP001412.1-201ENST00000608405 714 ntBASIC16.37■□□□□ 0.21
HLA-DPB1P04440 AL031985.4-201ENST00000642138 673 ntBASIC16.37■□□□□ 0.21
HLA-DPB1P04440 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DPB1P04440 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DPB1P04440 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
HLA-DPB1P04440 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.37■□□□□ 0.21
HLA-DPB1P04440 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DPB1P04440 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DPB1P04440 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.37■□□□□ 0.21
HLA-DPB1P04440 AC108860.2-201ENST00000562760 2183 ntBASIC16.37■□□□□ 0.21
HLA-DPB1P04440 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DPB1P04440 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DPB1P04440 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DPB1P04440 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DPB1P04440 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
HLA-DPB1P04440 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
HLA-DPB1P04440 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DPB1P04440 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DPB1P04440 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
HLA-DPB1P04440 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DPB1P04440 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DPB1P04440 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DPB1P04440 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DPB1P04440 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.36■□□□□ 0.21
HLA-DPB1P04440 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DPB1P04440 KRT8P41-201ENST00000533985 1514 ntBASIC16.36■□□□□ 0.21
HLA-DPB1P04440 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DPB1P04440 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DPB1P04440 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.36■□□□□ 0.21
HLA-DPB1P04440 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.36■□□□□ 0.21
HLA-DPB1P04440 MIR718-201ENST00000390190 70 ntBASIC16.36■□□□□ 0.21
HLA-DPB1P04440 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DPB1P04440 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
HLA-DPB1P04440 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.36■□□□□ 0.21
HLA-DPB1P04440 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.36■□□□□ 0.21
HLA-DPB1P04440 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.36■□□□□ 0.21
HLA-DPB1P04440 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DPB1P04440 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.36■□□□□ 0.21
HLA-DPB1P04440 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.36■□□□□ 0.21
HLA-DPB1P04440 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.36■□□□□ 0.21
HLA-DPB1P04440 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.36■□□□□ 0.21
HLA-DPB1P04440 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DPB1P04440 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DPB1P04440 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DPB1P04440 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DPB1P04440 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DPB1P04440 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
HLA-DPB1P04440 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DPB1P04440 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DPB1P04440 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DPB1P04440 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DPB1P04440 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.36■□□□□ 0.21
HLA-DPB1P04440 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DPB1P04440 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms