Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CD74P04233 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CD74P04233 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.3■□□□□ 0.04
CD74P04233 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CD74P04233 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD74P04233 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CD74P04233 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CD74P04233 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD74P04233 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CD74P04233 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CD74P04233 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD74P04233 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD74P04233 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD74P04233 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CD74P04233 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CD74P04233 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CD74P04233 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CD74P04233 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD74P04233 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CD74P04233 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CD74P04233 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CD74P04233 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD74P04233 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CD74P04233 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC15.3■□□□□ 0.04
CD74P04233 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC15.3■□□□□ 0.04
CD74P04233 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC15.3■□□□□ 0.04
CD74P04233 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CD74P04233 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC15.3■□□□□ 0.04
CD74P04233 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CD74P04233 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC15.3■□□□□ 0.04
CD74P04233 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CD74P04233 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CD74P04233 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC15.3■□□□□ 0.04
CD74P04233 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD74P04233 CKBP1-201ENST00000565489 1086 ntBASIC15.3■□□□□ 0.04
CD74P04233 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD74P04233 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CD74P04233 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC15.3■□□□□ 0.04
CD74P04233 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD74P04233 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CD74P04233 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
CD74P04233 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD74P04233 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.3■□□□□ 0.04
CD74P04233 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD74P04233 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD74P04233 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD74P04233 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD74P04233 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CD74P04233 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.29■□□□□ 0.04
CD74P04233 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.29■□□□□ 0.04
CD74P04233 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
CD74P04233 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CD74P04233 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD74P04233 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CD74P04233 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC15.29■□□□□ 0.04
CD74P04233 AC009102.3-201ENST00000623118 1491 ntBASIC15.29■□□□□ 0.04
CD74P04233 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CD74P04233 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CD74P04233 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CD74P04233 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CD74P04233 MIR149-201ENST00000384879 89 ntBASIC15.29■□□□□ 0.04
CD74P04233 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC15.29■□□□□ 0.04
CD74P04233 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC15.29■□□□□ 0.04
CD74P04233 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC15.29■□□□□ 0.04
CD74P04233 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC15.29■□□□□ 0.04
CD74P04233 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC15.29■□□□□ 0.04
CD74P04233 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC15.29■□□□□ 0.04
CD74P04233 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
CD74P04233 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC15.29■□□□□ 0.04
CD74P04233 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD74P04233 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD74P04233 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD74P04233 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.29■□□□□ 0.04
CD74P04233 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD74P04233 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.29■□□□□ 0.04
CD74P04233 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CD74P04233 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD74P04233 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CD74P04233 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CD74P04233 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CD74P04233 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CD74P04233 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CD74P04233 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD74P04233 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.29■□□□□ 0.04
CD74P04233 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD74P04233 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD74P04233 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CD74P04233 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.28■□□□□ 0.04
CD74P04233 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.28■□□□□ 0.04
CD74P04233 OR6D1P-202ENST00000641007 5290 ntBASIC15.28■□□□□ 0.04
CD74P04233 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CD74P04233 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.28■□□□□ 0.04
CD74P04233 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD74P04233 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.28■□□□□ 0.04
CD74P04233 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD74P04233 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC15.28■□□□□ 0.04
CD74P04233 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.28■□□□□ 0.04
CD74P04233 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.28■□□□□ 0.04
CD74P04233 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD74P04233 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms