Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC11.29□□□□□ -0.6
APOBP04114 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC11.29□□□□□ -0.6
APOBP04114 ARTN-206ENST00000472435 402 ntTSL 3 BASIC11.29□□□□□ -0.6
APOBP04114 LSM12-202ENST00000585388 942 ntTSL 3 BASIC11.29□□□□□ -0.6
APOBP04114 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
APOBP04114 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC11.29□□□□□ -0.6
APOBP04114 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
APOBP04114 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
APOBP04114 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
APOBP04114 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
APOBP04114 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
APOBP04114 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOBP04114 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOBP04114 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOBP04114 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC11.28□□□□□ -0.6
APOBP04114 SPDYE21P-201ENST00000413323 827 ntBASIC11.28□□□□□ -0.6
APOBP04114 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC11.28□□□□□ -0.6
APOBP04114 MEIS3P1-201ENST00000495167 958 ntBASIC11.28□□□□□ -0.6
APOBP04114 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC11.28□□□□□ -0.6
APOBP04114 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC11.28□□□□□ -0.6
APOBP04114 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOBP04114 AC132938.6-201ENST00000623828 1655 ntBASIC11.28□□□□□ -0.6
APOBP04114 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
APOBP04114 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
APOBP04114 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
APOBP04114 RNF34-208ENST00000555076 593 ntTSL 3 BASIC11.28□□□□□ -0.6
APOBP04114 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
APOBP04114 AC091812.2-201ENST00000619081 385 ntBASIC11.28□□□□□ -0.6
APOBP04114 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
APOBP04114 LINC01126-201ENST00000623515 1646 ntBASIC11.28□□□□□ -0.6
APOBP04114 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOBP04114 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOBP04114 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC11.28□□□□□ -0.6
APOBP04114 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOBP04114 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOBP04114 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
APOBP04114 TSEN15P1-201ENST00000423257 515 ntBASIC11.28□□□□□ -0.6
APOBP04114 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC11.28□□□□□ -0.6
APOBP04114 MSRA-206ENST00000521209 814 ntTSL 3 BASIC11.28□□□□□ -0.6
APOBP04114 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC11.28□□□□□ -0.6
APOBP04114 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC11.28□□□□□ -0.6
APOBP04114 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC11.28□□□□□ -0.6
APOBP04114 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC11.28□□□□□ -0.6
APOBP04114 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOBP04114 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOBP04114 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOBP04114 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
APOBP04114 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC11.28□□□□□ -0.6
APOBP04114 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOBP04114 RHOQP3-201ENST00000437982 621 ntBASIC11.28□□□□□ -0.6
APOBP04114 AC093512.1-201ENST00000617969 520 ntBASIC11.28□□□□□ -0.6
APOBP04114 CITED2-204ENST00000618718 901 ntTSL 2 BASIC11.28□□□□□ -0.6
APOBP04114 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC11.28□□□□□ -0.6
APOBP04114 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC11.28□□□□□ -0.6
APOBP04114 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC11.27□□□□□ -0.6
APOBP04114 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
APOBP04114 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC11.27□□□□□ -0.6
APOBP04114 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC11.27□□□□□ -0.6
APOBP04114 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
APOBP04114 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC11.27□□□□□ -0.6
APOBP04114 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC11.27□□□□□ -0.6
APOBP04114 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC11.27□□□□□ -0.6
APOBP04114 AC015911.4-201ENST00000588022 1070 ntBASIC11.27□□□□□ -0.6
APOBP04114 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC11.27□□□□□ -0.6
APOBP04114 AC010507.1-201ENST00000633895 436 ntBASIC11.27□□□□□ -0.6
APOBP04114 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
APOBP04114 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
APOBP04114 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.6
APOBP04114 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
APOBP04114 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
APOBP04114 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
APOBP04114 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC11.27□□□□□ -0.61
APOBP04114 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
APOBP04114 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
APOBP04114 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC11.27□□□□□ -0.61
APOBP04114 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
APOBP04114 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
APOBP04114 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
APOBP04114 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
APOBP04114 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
APOBP04114 AC005034.1-201ENST00000426657 489 ntBASIC11.27□□□□□ -0.61
APOBP04114 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC11.27□□□□□ -0.61
APOBP04114 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
APOBP04114 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC11.27□□□□□ -0.61
APOBP04114 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
APOBP04114 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
APOBP04114 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
APOBP04114 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
APOBP04114 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
APOBP04114 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
APOBP04114 POLI-202ENST00000406285 2030 ntTSL 2 BASIC11.27□□□□□ -0.61
APOBP04114 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC11.26□□□□□ -0.61
APOBP04114 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
APOBP04114 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC11.26□□□□□ -0.61
APOBP04114 AC105339.1-204ENST00000636249 355 ntBASIC11.26□□□□□ -0.61
APOBP04114 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOBP04114 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
APOBP04114 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
APOBP04114 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC11.26□□□□□ -0.61
APOBP04114 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC11.26□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms