Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
KRT6AP02538 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.66■□□□□ 0.42
KRT6AP02538 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT6AP02538 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
KRT6AP02538 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT6AP02538 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT6AP02538 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KRT6AP02538 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.65■□□□□ 0.42
KRT6AP02538 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
KRT6AP02538 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.65■□□□□ 0.42
KRT6AP02538 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KRT6AP02538 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.65■□□□□ 0.42
KRT6AP02538 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KRT6AP02538 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.65■□□□□ 0.42
KRT6AP02538 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.65■□□□□ 0.42
KRT6AP02538 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT6AP02538 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.65■□□□□ 0.42
KRT6AP02538 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT6AP02538 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT6AP02538 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.65■□□□□ 0.42
KRT6AP02538 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.65■□□□□ 0.42
KRT6AP02538 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT6AP02538 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
KRT6AP02538 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
KRT6AP02538 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
KRT6AP02538 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT6AP02538 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.64■□□□□ 0.41
KRT6AP02538 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT6AP02538 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
KRT6AP02538 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT6AP02538 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT6AP02538 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KRT6AP02538 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
KRT6AP02538 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT6AP02538 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT6AP02538 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT6AP02538 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.64■□□□□ 0.41
KRT6AP02538 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
KRT6AP02538 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT6AP02538 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT6AP02538 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
KRT6AP02538 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT6AP02538 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT6AP02538 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT6AP02538 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT6AP02538 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT6AP02538 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KRT6AP02538 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT6AP02538 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT6AP02538 GNAS-203ENST00000306120 1878 ntBASIC17.64■□□□□ 0.41
KRT6AP02538 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.64■□□□□ 0.41
KRT6AP02538 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT6AP02538 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.64■□□□□ 0.41
KRT6AP02538 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
KRT6AP02538 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KRT6AP02538 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.63■□□□□ 0.41
KRT6AP02538 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
KRT6AP02538 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KRT6AP02538 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
KRT6AP02538 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KRT6AP02538 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KRT6AP02538 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
KRT6AP02538 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.63■□□□□ 0.41
KRT6AP02538 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KRT6AP02538 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
KRT6AP02538 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
KRT6AP02538 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.63■□□□□ 0.41
KRT6AP02538 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.63■□□□□ 0.41
KRT6AP02538 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.63■□□□□ 0.41
KRT6AP02538 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.63■□□□□ 0.41
KRT6AP02538 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.63■□□□□ 0.41
KRT6AP02538 MIR4497-201ENST00000583208 89 ntBASIC17.63■□□□□ 0.41
KRT6AP02538 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KRT6AP02538 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
KRT6AP02538 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
KRT6AP02538 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
KRT6AP02538 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KRT6AP02538 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KRT6AP02538 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
KRT6AP02538 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KRT6AP02538 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KRT6AP02538 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KRT6AP02538 AC067852.2-201ENST00000590513 2313 ntBASIC17.63■□□□□ 0.41
KRT6AP02538 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT6AP02538 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KRT6AP02538 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
KRT6AP02538 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT6AP02538 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT6AP02538 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT6AP02538 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.62■□□□□ 0.41
KRT6AP02538 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT6AP02538 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
KRT6AP02538 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.62■□□□□ 0.41
KRT6AP02538 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KRT6AP02538 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
KRT6AP02538 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT6AP02538 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.62■□□□□ 0.41
KRT6AP02538 AL512604.3-201ENST00000569583 964 ntBASIC17.62■□□□□ 0.41
KRT6AP02538 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.62■□□□□ 0.41
KRT6AP02538 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms