Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CD4P01730 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CD4P01730 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CD4P01730 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.06■□□□□ 0.8
CD4P01730 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CD4P01730 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CD4P01730 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CD4P01730 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CD4P01730 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CD4P01730 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.05■□□□□ 0.8
CD4P01730 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CD4P01730 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CD4P01730 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CD4P01730 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CD4P01730 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CD4P01730 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.05■□□□□ 0.8
CD4P01730 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CD4P01730 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.05■□□□□ 0.8
CD4P01730 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC20.05■□□□□ 0.8
CD4P01730 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.05■□□□□ 0.8
CD4P01730 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.05■□□□□ 0.8
CD4P01730 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.05■□□□□ 0.8
CD4P01730 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.05■□□□□ 0.8
CD4P01730 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CD4P01730 AC034105.1-201ENST00000563488 319 ntBASIC20.05■□□□□ 0.8
CD4P01730 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.05■□□□□ 0.8
CD4P01730 AC140113.2-201ENST00000604370 208 ntBASIC20.05■□□□□ 0.8
CD4P01730 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC20.05■□□□□ 0.8
CD4P01730 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CD4P01730 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.05■□□□□ 0.8
CD4P01730 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
CD4P01730 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CD4P01730 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CD4P01730 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CD4P01730 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.05■□□□□ 0.8
CD4P01730 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CD4P01730 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CD4P01730 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CD4P01730 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CD4P01730 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CD4P01730 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CD4P01730 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
CD4P01730 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CD4P01730 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CD4P01730 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CD4P01730 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CD4P01730 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CD4P01730 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
CD4P01730 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CD4P01730 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CD4P01730 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CD4P01730 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.04■□□□□ 0.8
CD4P01730 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.04■□□□□ 0.8
CD4P01730 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CD4P01730 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CD4P01730 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CD4P01730 RPS2P1-201ENST00000434010 821 ntBASIC20.04■□□□□ 0.8
CD4P01730 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.04■□□□□ 0.8
CD4P01730 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20.04■□□□□ 0.8
CD4P01730 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.04■□□□□ 0.8
CD4P01730 AL691403.2-201ENST00000618460 490 ntBASIC20.04■□□□□ 0.8
CD4P01730 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CD4P01730 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CD4P01730 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CD4P01730 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CD4P01730 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CD4P01730 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.04■□□□□ 0.8
CD4P01730 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CD4P01730 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.04■□□□□ 0.8
CD4P01730 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CD4P01730 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.04■□□□□ 0.8
CD4P01730 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.04■□□□□ 0.8
CD4P01730 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CD4P01730 AC125634.1-201ENST00000438758 1403 ntBASIC20.03■□□□□ 0.8
CD4P01730 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CD4P01730 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.03■□□□□ 0.8
CD4P01730 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CD4P01730 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.03■□□□□ 0.8
CD4P01730 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CD4P01730 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CD4P01730 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CD4P01730 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CD4P01730 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.03■□□□□ 0.8
CD4P01730 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.03■□□□□ 0.8
CD4P01730 ABCD1P5-201ENST00000445663 754 ntBASIC20.03■□□□□ 0.8
CD4P01730 MTCL1P1-201ENST00000446207 792 ntBASIC20.03■□□□□ 0.8
CD4P01730 AC012640.2-201ENST00000561606 901 ntBASIC20.03■□□□□ 0.8
CD4P01730 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.03■□□□□ 0.8
CD4P01730 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC20.03■□□□□ 0.8
CD4P01730 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.03■□□□□ 0.8
CD4P01730 AL356488.2-201ENST00000602755 427 ntBASIC20.03■□□□□ 0.8
CD4P01730 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.03■□□□□ 0.8
CD4P01730 AC009102.3-201ENST00000623118 1491 ntBASIC20.03■□□□□ 0.8
CD4P01730 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CD4P01730 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.03■□□□□ 0.8
CD4P01730 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CD4P01730 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CD4P01730 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CD4P01730 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CD4P01730 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms