Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
MBD3O95983 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.88■□□□□ 0.93
MBD3O95983 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.88■□□□□ 0.93
MBD3O95983 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
MBD3O95983 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MBD3O95983 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MBD3O95983 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
MBD3O95983 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MBD3O95983 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
MBD3O95983 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MBD3O95983 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MBD3O95983 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MBD3O95983 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
MBD3O95983 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
MBD3O95983 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
MBD3O95983 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.87■□□□□ 0.93
MBD3O95983 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MBD3O95983 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MBD3O95983 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC20.87■□□□□ 0.93
MBD3O95983 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
MBD3O95983 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
MBD3O95983 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.87■□□□□ 0.93
MBD3O95983 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.87■□□□□ 0.93
MBD3O95983 IKBKGP1-201ENST00000612193 1073 ntBASIC20.87■□□□□ 0.93
MBD3O95983 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.87■□□□□ 0.93
MBD3O95983 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
MBD3O95983 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.87■□□□□ 0.93
MBD3O95983 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MBD3O95983 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
MBD3O95983 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.87■□□□□ 0.93
MBD3O95983 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
MBD3O95983 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.87■□□□□ 0.93
MBD3O95983 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
MBD3O95983 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
MBD3O95983 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
MBD3O95983 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC20.86■□□□□ 0.93
MBD3O95983 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.86■□□□□ 0.93
MBD3O95983 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.86■□□□□ 0.93
MBD3O95983 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.86■□□□□ 0.93
MBD3O95983 MIR149-201ENST00000384879 89 ntBASIC20.86■□□□□ 0.93
MBD3O95983 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
MBD3O95983 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.86■□□□□ 0.93
MBD3O95983 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
MBD3O95983 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.86■□□□□ 0.93
MBD3O95983 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
MBD3O95983 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MBD3O95983 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.86■□□□□ 0.93
MBD3O95983 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.86■□□□□ 0.93
MBD3O95983 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MBD3O95983 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.86■□□□□ 0.93
MBD3O95983 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.86■□□□□ 0.93
MBD3O95983 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MBD3O95983 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MBD3O95983 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC20.86■□□□□ 0.93
MBD3O95983 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MBD3O95983 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.85■□□□□ 0.93
MBD3O95983 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MBD3O95983 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MBD3O95983 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
MBD3O95983 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.85■□□□□ 0.93
MBD3O95983 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MBD3O95983 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
MBD3O95983 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MBD3O95983 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
MBD3O95983 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
MBD3O95983 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.85■□□□□ 0.93
MBD3O95983 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.85■□□□□ 0.93
MBD3O95983 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.85■□□□□ 0.93
MBD3O95983 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.85■□□□□ 0.93
MBD3O95983 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.85■□□□□ 0.93
MBD3O95983 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
MBD3O95983 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.85■□□□□ 0.93
MBD3O95983 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.85■□□□□ 0.93
MBD3O95983 AL137784.2-201ENST00000607332 1000 ntBASIC20.85■□□□□ 0.93
MBD3O95983 AC008622.2-201ENST00000617006 1229 ntBASIC20.85■□□□□ 0.93
MBD3O95983 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.85■□□□□ 0.93
MBD3O95983 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MBD3O95983 AC133963.1-201ENST00000504166 1679 ntBASIC20.85■□□□□ 0.93
MBD3O95983 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MBD3O95983 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
MBD3O95983 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MBD3O95983 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MBD3O95983 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MBD3O95983 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
MBD3O95983 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
MBD3O95983 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC20.84■□□□□ 0.93
MBD3O95983 AL118508.1-201ENST00000613502 2345 ntBASIC20.84■□□□□ 0.93
MBD3O95983 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.84■□□□□ 0.93
MBD3O95983 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MBD3O95983 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MBD3O95983 AL163051.1-201ENST00000569214 1512 ntBASIC20.84■□□□□ 0.93
MBD3O95983 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC20.84■□□□□ 0.93
MBD3O95983 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.84■□□□□ 0.93
MBD3O95983 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
MBD3O95983 AL023284.2-201ENST00000405850 579 ntBASIC20.84■□□□□ 0.93
MBD3O95983 MCCD1P1-208ENST00000445732 328 ntBASIC20.84■□□□□ 0.93
MBD3O95983 UNC93B5-201ENST00000530315 699 ntBASIC20.84■□□□□ 0.93
MBD3O95983 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.84■□□□□ 0.93
MBD3O95983 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.84■□□□□ 0.93
MBD3O95983 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms