Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
TRIM13O60858 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.93■□□□□ 0.46
TRIM13O60858 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM13O60858 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM13O60858 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM13O60858 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM13O60858 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM13O60858 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM13O60858 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM13O60858 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.92■□□□□ 0.46
TRIM13O60858 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM13O60858 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM13O60858 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM13O60858 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.92■□□□□ 0.46
TRIM13O60858 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.92■□□□□ 0.46
TRIM13O60858 HOXB1-202ENST00000577092 1414 ntBASIC17.92■□□□□ 0.46
TRIM13O60858 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM13O60858 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TRIM13O60858 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.92■□□□□ 0.46
TRIM13O60858 AC012313.1-201ENST00000593393 3059 ntBASIC17.92■□□□□ 0.46
TRIM13O60858 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM13O60858 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM13O60858 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.92■□□□□ 0.46
TRIM13O60858 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.92■□□□□ 0.46
TRIM13O60858 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TRIM13O60858 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.92■□□□□ 0.46
TRIM13O60858 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM13O60858 AC116562.2-201ENST00000507042 360 ntBASIC17.92■□□□□ 0.46
TRIM13O60858 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.92■□□□□ 0.46
TRIM13O60858 CD177P1-201ENST00000606252 935 ntBASIC17.92■□□□□ 0.46
TRIM13O60858 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.92■□□□□ 0.46
TRIM13O60858 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.92■□□□□ 0.46
TRIM13O60858 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM13O60858 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM13O60858 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
TRIM13O60858 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.92■□□□□ 0.46
TRIM13O60858 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.92■□□□□ 0.46
TRIM13O60858 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM13O60858 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM13O60858 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
TRIM13O60858 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM13O60858 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.92■□□□□ 0.46
TRIM13O60858 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
TRIM13O60858 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TRIM13O60858 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.92■□□□□ 0.46
TRIM13O60858 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TRIM13O60858 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM13O60858 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TRIM13O60858 AC108860.2-201ENST00000562760 2183 ntBASIC17.91■□□□□ 0.46
TRIM13O60858 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM13O60858 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM13O60858 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
TRIM13O60858 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM13O60858 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM13O60858 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM13O60858 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM13O60858 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.91■□□□□ 0.46
TRIM13O60858 AC097488.1-201ENST00000507834 756 ntBASIC17.91■□□□□ 0.46
TRIM13O60858 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.91■□□□□ 0.46
TRIM13O60858 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM13O60858 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM13O60858 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM13O60858 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM13O60858 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM13O60858 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM13O60858 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM13O60858 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM13O60858 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM13O60858 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM13O60858 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM13O60858 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM13O60858 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM13O60858 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM13O60858 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM13O60858 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM13O60858 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM13O60858 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM13O60858 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TRIM13O60858 KRT8P7-201ENST00000533003 1432 ntBASIC17.9■□□□□ 0.46
TRIM13O60858 AL135905.2-201ENST00000584934 1404 ntBASIC17.9■□□□□ 0.46
TRIM13O60858 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM13O60858 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM13O60858 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.9■□□□□ 0.46
TRIM13O60858 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM13O60858 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM13O60858 PP12613-201ENST00000424958 2230 ntBASIC17.9■□□□□ 0.46
TRIM13O60858 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
TRIM13O60858 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.9■□□□□ 0.46
TRIM13O60858 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TRIM13O60858 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.9■□□□□ 0.46
TRIM13O60858 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM13O60858 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM13O60858 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
TRIM13O60858 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM13O60858 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM13O60858 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.9■□□□□ 0.46
TRIM13O60858 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
TRIM13O60858 MIR4674-201ENST00000582457 87 ntBASIC17.9■□□□□ 0.46
TRIM13O60858 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
TRIM13O60858 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms