Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC30.94■■■□□ 2.54
CUX2O14529 PARP8-218ENST00000513738 596 ntTSL 4 BASIC30.94■■■□□ 2.54
CUX2O14529 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC30.94■■■□□ 2.54
CUX2O14529 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC30.94■■■□□ 2.54
CUX2O14529 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC30.94■■■□□ 2.54
CUX2O14529 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC30.94■■■□□ 2.54
CUX2O14529 LINC02560-201ENST00000596379 459 ntBASIC30.94■■■□□ 2.54
CUX2O14529 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC30.94■■■□□ 2.54
CUX2O14529 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CUX2O14529 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CUX2O14529 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC30.93■■■□□ 2.54
CUX2O14529 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CUX2O14529 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CUX2O14529 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC30.93■■■□□ 2.54
CUX2O14529 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC30.93■■■□□ 2.54
CUX2O14529 AC051619.7-201ENST00000568314 623 ntBASIC30.93■■■□□ 2.54
CUX2O14529 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC30.93■■■□□ 2.54
CUX2O14529 AC010507.1-201ENST00000633895 436 ntBASIC30.93■■■□□ 2.54
CUX2O14529 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC30.93■■■□□ 2.54
CUX2O14529 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CUX2O14529 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CUX2O14529 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC30.92■■■□□ 2.54
CUX2O14529 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CUX2O14529 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC30.92■■■□□ 2.54
CUX2O14529 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC30.92■■■□□ 2.54
CUX2O14529 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CUX2O14529 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CUX2O14529 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC30.92■■■□□ 2.54
CUX2O14529 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
CUX2O14529 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC30.92■■■□□ 2.54
CUX2O14529 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC30.92■■■□□ 2.54
CUX2O14529 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
CUX2O14529 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CUX2O14529 LINC01521-201ENST00000504184 1943 ntBASIC30.92■■■□□ 2.54
CUX2O14529 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CUX2O14529 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC30.91■■■□□ 2.54
CUX2O14529 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC30.91■■■□□ 2.54
CUX2O14529 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CUX2O14529 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC30.91■■■□□ 2.54
CUX2O14529 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC30.91■■■□□ 2.54
CUX2O14529 AC055876.3-201ENST00000431496 288 ntBASIC30.91■■■□□ 2.54
CUX2O14529 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC30.91■■■□□ 2.54
CUX2O14529 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC30.91■■■□□ 2.54
CUX2O14529 KRT19P2-202ENST00000557173 1012 ntBASIC30.91■■■□□ 2.54
CUX2O14529 AC138649.4-201ENST00000612222 287 ntBASIC30.91■■■□□ 2.54
CUX2O14529 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CUX2O14529 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC30.91■■■□□ 2.54
CUX2O14529 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC30.91■■■□□ 2.54
CUX2O14529 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC30.91■■■□□ 2.54
CUX2O14529 KRT8P50-201ENST00000562022 1438 ntBASIC30.91■■■□□ 2.54
CUX2O14529 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
CUX2O14529 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC30.9■■■□□ 2.54
CUX2O14529 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC30.9■■■□□ 2.54
CUX2O14529 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
CUX2O14529 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC30.9■■■□□ 2.54
CUX2O14529 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
CUX2O14529 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
CUX2O14529 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC30.9■■■□□ 2.54
CUX2O14529 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
CUX2O14529 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC30.9■■■□□ 2.54
CUX2O14529 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
CUX2O14529 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC30.9■■■□□ 2.54
CUX2O14529 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
CUX2O14529 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
CUX2O14529 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC30.89■■■□□ 2.54
CUX2O14529 DDT-204ENST00000404092 805 ntTSL 3 BASIC30.89■■■□□ 2.54
CUX2O14529 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC30.89■■■□□ 2.54
CUX2O14529 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
CUX2O14529 AC025048.6-201ENST00000634326 1161 ntBASIC30.89■■■□□ 2.54
CUX2O14529 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
CUX2O14529 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
CUX2O14529 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC30.89■■■□□ 2.54
CUX2O14529 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC30.89■■■□□ 2.54
CUX2O14529 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
CUX2O14529 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
CUX2O14529 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
CUX2O14529 NME2P1-201ENST00000426182 414 ntBASIC30.89■■■□□ 2.53
CUX2O14529 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC30.89■■■□□ 2.53
CUX2O14529 CD63-210ENST00000550776 870 ntTSL 5 BASIC30.89■■■□□ 2.53
CUX2O14529 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC30.88■■■□□ 2.53
CUX2O14529 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC30.88■■■□□ 2.53
CUX2O14529 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
CUX2O14529 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CUX2O14529 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CUX2O14529 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
CUX2O14529 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC30.88■■■□□ 2.53
CUX2O14529 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CUX2O14529 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CUX2O14529 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CUX2O14529 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC30.88■■■□□ 2.53
CUX2O14529 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
CUX2O14529 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC30.88■■■□□ 2.53
CUX2O14529 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC30.88■■■□□ 2.53
CUX2O14529 LINC01006-201ENST00000333319 2292 ntBASIC30.87■■■□□ 2.53
CUX2O14529 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC30.87■■■□□ 2.53
CUX2O14529 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC30.87■■■□□ 2.53
CUX2O14529 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC30.87■■■□□ 2.53
CUX2O14529 SPDYE22P-201ENST00000582158 798 ntBASIC30.87■■■□□ 2.53
CUX2O14529 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC30.87■■■□□ 2.53
CUX2O14529 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC30.87■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms