Protein–RNA interactions for Protein: A1L190

SYCE3, Synaptonemal complex central element protein 3, humanhuman

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE3A1L190 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.72■□□□□ 0.91
SYCE3A1L190 KRT8P50-201ENST00000562022 1438 ntBASIC20.72■□□□□ 0.91
SYCE3A1L190 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.72■□□□□ 0.91
SYCE3A1L190 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.72■□□□□ 0.91
SYCE3A1L190 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SYCE3A1L190 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SYCE3A1L190 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SYCE3A1L190 AC091390.4-202ENST00000476426 537 ntBASIC20.72■□□□□ 0.91
SYCE3A1L190 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
SYCE3A1L190 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SYCE3A1L190 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SYCE3A1L190 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.72■□□□□ 0.91
SYCE3A1L190 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SYCE3A1L190 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SYCE3A1L190 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SYCE3A1L190 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC20.71■□□□□ 0.91
SYCE3A1L190 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SYCE3A1L190 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SYCE3A1L190 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SYCE3A1L190 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SYCE3A1L190 AL139384.1-201ENST00000612143 3047 ntBASIC20.71■□□□□ 0.91
SYCE3A1L190 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
SYCE3A1L190 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.71■□□□□ 0.91
SYCE3A1L190 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SYCE3A1L190 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC20.71■□□□□ 0.91
SYCE3A1L190 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SYCE3A1L190 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SYCE3A1L190 AC004980.1-204ENST00000429707 299 ntBASIC20.71■□□□□ 0.91
SYCE3A1L190 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.71■□□□□ 0.91
SYCE3A1L190 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SYCE3A1L190 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.71■□□□□ 0.91
SYCE3A1L190 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.71■□□□□ 0.91
SYCE3A1L190 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.71■□□□□ 0.91
SYCE3A1L190 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SYCE3A1L190 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SYCE3A1L190 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SYCE3A1L190 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SYCE3A1L190 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.71■□□□□ 0.91
SYCE3A1L190 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.71■□□□□ 0.91
SYCE3A1L190 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SYCE3A1L190 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SYCE3A1L190 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.7■□□□□ 0.91
SYCE3A1L190 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.7■□□□□ 0.91
SYCE3A1L190 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SYCE3A1L190 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
SYCE3A1L190 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SYCE3A1L190 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SYCE3A1L190 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SYCE3A1L190 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC20.7■□□□□ 0.9
SYCE3A1L190 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SYCE3A1L190 SDHAP2-201ENST00000455183 2001 ntBASIC20.7■□□□□ 0.9
SYCE3A1L190 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SYCE3A1L190 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SYCE3A1L190 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SYCE3A1L190 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SYCE3A1L190 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
SYCE3A1L190 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.7■□□□□ 0.9
SYCE3A1L190 AL445675.2-201ENST00000620291 557 ntBASIC20.7■□□□□ 0.9
SYCE3A1L190 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SYCE3A1L190 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SYCE3A1L190 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SYCE3A1L190 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC20.7■□□□□ 0.9
SYCE3A1L190 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SYCE3A1L190 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC20.7■□□□□ 0.9
SYCE3A1L190 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SYCE3A1L190 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.7■□□□□ 0.9
SYCE3A1L190 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SYCE3A1L190 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
SYCE3A1L190 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SYCE3A1L190 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYCE3A1L190 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SYCE3A1L190 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC20.69■□□□□ 0.9
SYCE3A1L190 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SYCE3A1L190 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYCE3A1L190 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYCE3A1L190 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC20.69■□□□□ 0.9
SYCE3A1L190 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SYCE3A1L190 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SYCE3A1L190 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SYCE3A1L190 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC20.69■□□□□ 0.9
SYCE3A1L190 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SYCE3A1L190 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYCE3A1L190 AC093010.1-201ENST00000473625 1624 ntBASIC20.69■□□□□ 0.9
SYCE3A1L190 AL121761.2-201ENST00000598007 1648 ntBASIC20.69■□□□□ 0.9
SYCE3A1L190 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
SYCE3A1L190 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.69■□□□□ 0.9
SYCE3A1L190 AC131212.4-201ENST00000623606 975 ntBASIC20.69■□□□□ 0.9
SYCE3A1L190 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.69■□□□□ 0.9
SYCE3A1L190 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SYCE3A1L190 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SYCE3A1L190 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.69■□□□□ 0.9
SYCE3A1L190 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SYCE3A1L190 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYCE3A1L190 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SYCE3A1L190 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.69■□□□□ 0.9
SYCE3A1L190 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYCE3A1L190 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYCE3A1L190 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SYCE3A1L190 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SYCE3A1L190 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms