Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HRH3Q9Y5N1 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
HRH3Q9Y5N1 AL133373.2-201ENST00000623187 2828 ntBASIC16.82■□□□□ 0.28
HRH3Q9Y5N1 NPAP1P7-201ENST00000613027 823 ntBASIC16.82■□□□□ 0.28
HRH3Q9Y5N1 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HRH3Q9Y5N1 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HRH3Q9Y5N1 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
HRH3Q9Y5N1 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
HRH3Q9Y5N1 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HRH3Q9Y5N1 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HRH3Q9Y5N1 WIZP1-201ENST00000531444 2299 ntBASIC16.82■□□□□ 0.28
HRH3Q9Y5N1 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HRH3Q9Y5N1 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HRH3Q9Y5N1 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HRH3Q9Y5N1 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HRH3Q9Y5N1 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.82■□□□□ 0.28
HRH3Q9Y5N1 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.82■□□□□ 0.28
HRH3Q9Y5N1 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HRH3Q9Y5N1 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HRH3Q9Y5N1 AC020763.4-201ENST00000623414 4170 ntBASIC16.81■□□□□ 0.28
HRH3Q9Y5N1 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
HRH3Q9Y5N1 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.81■□□□□ 0.28
HRH3Q9Y5N1 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
HRH3Q9Y5N1 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HRH3Q9Y5N1 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.81■□□□□ 0.28
HRH3Q9Y5N1 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HRH3Q9Y5N1 KRT8P7-201ENST00000533003 1432 ntBASIC16.81■□□□□ 0.28
HRH3Q9Y5N1 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
HRH3Q9Y5N1 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HRH3Q9Y5N1 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HRH3Q9Y5N1 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HRH3Q9Y5N1 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HRH3Q9Y5N1 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.81■□□□□ 0.28
HRH3Q9Y5N1 ATP5G2P1-201ENST00000433580 426 ntBASIC16.81■□□□□ 0.28
HRH3Q9Y5N1 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HRH3Q9Y5N1 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.81■□□□□ 0.28
HRH3Q9Y5N1 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HRH3Q9Y5N1 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.81■□□□□ 0.28
HRH3Q9Y5N1 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HRH3Q9Y5N1 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HRH3Q9Y5N1 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HRH3Q9Y5N1 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HRH3Q9Y5N1 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HRH3Q9Y5N1 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HRH3Q9Y5N1 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.81■□□□□ 0.28
HRH3Q9Y5N1 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.81■□□□□ 0.28
HRH3Q9Y5N1 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HRH3Q9Y5N1 MYLKP1-201ENST00000509077 1580 ntBASIC16.81■□□□□ 0.28
HRH3Q9Y5N1 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HRH3Q9Y5N1 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HRH3Q9Y5N1 AL163051.1-201ENST00000569214 1512 ntBASIC16.8■□□□□ 0.28
HRH3Q9Y5N1 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.8■□□□□ 0.28
HRH3Q9Y5N1 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.8■□□□□ 0.28
HRH3Q9Y5N1 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
HRH3Q9Y5N1 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HRH3Q9Y5N1 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
HRH3Q9Y5N1 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HRH3Q9Y5N1 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HRH3Q9Y5N1 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.8■□□□□ 0.28
HRH3Q9Y5N1 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.8■□□□□ 0.28
HRH3Q9Y5N1 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HRH3Q9Y5N1 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HRH3Q9Y5N1 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HRH3Q9Y5N1 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
HRH3Q9Y5N1 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.8■□□□□ 0.28
HRH3Q9Y5N1 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HRH3Q9Y5N1 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
HRH3Q9Y5N1 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.8■□□□□ 0.28
HRH3Q9Y5N1 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HRH3Q9Y5N1 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HRH3Q9Y5N1 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
HRH3Q9Y5N1 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HRH3Q9Y5N1 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HRH3Q9Y5N1 AL450487.1-201ENST00000426799 995 ntBASIC16.8■□□□□ 0.28
HRH3Q9Y5N1 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.8■□□□□ 0.28
HRH3Q9Y5N1 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
HRH3Q9Y5N1 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HRH3Q9Y5N1 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HRH3Q9Y5N1 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.8■□□□□ 0.28
HRH3Q9Y5N1 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HRH3Q9Y5N1 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HRH3Q9Y5N1 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
HRH3Q9Y5N1 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HRH3Q9Y5N1 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
HRH3Q9Y5N1 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HRH3Q9Y5N1 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
HRH3Q9Y5N1 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HRH3Q9Y5N1 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HRH3Q9Y5N1 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HRH3Q9Y5N1 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HRH3Q9Y5N1 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.79■□□□□ 0.28
HRH3Q9Y5N1 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HRH3Q9Y5N1 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HRH3Q9Y5N1 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HRH3Q9Y5N1 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HRH3Q9Y5N1 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HRH3Q9Y5N1 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HRH3Q9Y5N1 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HRH3Q9Y5N1 AL645929.1-201ENST00000420084 975 ntBASIC16.79■□□□□ 0.28
HRH3Q9Y5N1 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms