Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CCNL1Q9UK58 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CCNL1Q9UK58 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC23.08■■□□□ 1.28
CCNL1Q9UK58 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC23.08■■□□□ 1.28
CCNL1Q9UK58 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
CCNL1Q9UK58 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CCNL1Q9UK58 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC23.08■■□□□ 1.28
CCNL1Q9UK58 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
CCNL1Q9UK58 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CCNL1Q9UK58 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC23.07■■□□□ 1.28
CCNL1Q9UK58 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CCNL1Q9UK58 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC23.07■■□□□ 1.28
CCNL1Q9UK58 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CCNL1Q9UK58 AC254562.1-201ENST00000417586 456 ntBASIC23.07■■□□□ 1.28
CCNL1Q9UK58 HTR5BP-201ENST00000430851 1154 ntBASIC23.07■■□□□ 1.28
CCNL1Q9UK58 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC23.07■■□□□ 1.28
CCNL1Q9UK58 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC23.07■■□□□ 1.28
CCNL1Q9UK58 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CCNL1Q9UK58 CFL1-212ENST00000531413 636 ntTSL 3 BASIC23.07■■□□□ 1.28
CCNL1Q9UK58 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC23.07■■□□□ 1.28
CCNL1Q9UK58 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC23.07■■□□□ 1.28
CCNL1Q9UK58 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CCNL1Q9UK58 POLI-202ENST00000406285 2030 ntTSL 2 BASIC23.07■■□□□ 1.28
CCNL1Q9UK58 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CCNL1Q9UK58 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC23.07■■□□□ 1.28
CCNL1Q9UK58 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC23.07■■□□□ 1.28
CCNL1Q9UK58 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC23.07■■□□□ 1.28
CCNL1Q9UK58 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CCNL1Q9UK58 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CCNL1Q9UK58 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CCNL1Q9UK58 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC23.06■■□□□ 1.28
CCNL1Q9UK58 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CCNL1Q9UK58 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC23.06■■□□□ 1.28
CCNL1Q9UK58 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CCNL1Q9UK58 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CCNL1Q9UK58 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
CCNL1Q9UK58 AC136632.2-201ENST00000512891 861 ntBASIC23.06■■□□□ 1.28
CCNL1Q9UK58 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC23.06■■□□□ 1.28
CCNL1Q9UK58 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
CCNL1Q9UK58 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC23.06■■□□□ 1.28
CCNL1Q9UK58 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CCNL1Q9UK58 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CCNL1Q9UK58 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CCNL1Q9UK58 AC004817.3-201ENST00000602957 2129 ntBASIC23.06■■□□□ 1.28
CCNL1Q9UK58 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC23.06■■□□□ 1.28
CCNL1Q9UK58 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CCNL1Q9UK58 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC23.06■■□□□ 1.28
CCNL1Q9UK58 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC23.06■■□□□ 1.28
CCNL1Q9UK58 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
CCNL1Q9UK58 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCNL1Q9UK58 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCNL1Q9UK58 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCNL1Q9UK58 AC002310.6-201ENST00000624451 1377 ntBASIC23.05■■□□□ 1.28
CCNL1Q9UK58 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC23.05■■□□□ 1.28
CCNL1Q9UK58 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CCNL1Q9UK58 AC007967.3-201ENST00000434308 558 ntBASIC23.05■■□□□ 1.28
CCNL1Q9UK58 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC23.05■■□□□ 1.28
CCNL1Q9UK58 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC23.05■■□□□ 1.28
CCNL1Q9UK58 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CCNL1Q9UK58 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC23.05■■□□□ 1.28
CCNL1Q9UK58 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC23.05■■□□□ 1.28
CCNL1Q9UK58 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
CCNL1Q9UK58 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCNL1Q9UK58 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
CCNL1Q9UK58 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC23.05■■□□□ 1.28
CCNL1Q9UK58 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC23.05■■□□□ 1.28
CCNL1Q9UK58 AL158211.5-201ENST00000623583 2518 ntBASIC23.05■■□□□ 1.28
CCNL1Q9UK58 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCNL1Q9UK58 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC23.05■■□□□ 1.28
CCNL1Q9UK58 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCNL1Q9UK58 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCNL1Q9UK58 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCNL1Q9UK58 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
CCNL1Q9UK58 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCNL1Q9UK58 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CCNL1Q9UK58 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC23.04■■□□□ 1.28
CCNL1Q9UK58 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CCNL1Q9UK58 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCNL1Q9UK58 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCNL1Q9UK58 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCNL1Q9UK58 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
CCNL1Q9UK58 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCNL1Q9UK58 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC23.04■■□□□ 1.28
CCNL1Q9UK58 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC23.04■■□□□ 1.28
CCNL1Q9UK58 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC23.04■■□□□ 1.28
CCNL1Q9UK58 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC23.04■■□□□ 1.28
CCNL1Q9UK58 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
CCNL1Q9UK58 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC23.04■■□□□ 1.28
CCNL1Q9UK58 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC23.04■■□□□ 1.28
CCNL1Q9UK58 AC092865.6-201ENST00000642101 219 ntBASIC23.04■■□□□ 1.28
CCNL1Q9UK58 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
CCNL1Q9UK58 PMPCAP1-201ENST00000508114 1576 ntBASIC23.04■■□□□ 1.28
CCNL1Q9UK58 AL032819.2-201ENST00000624543 2162 ntBASIC23.04■■□□□ 1.28
CCNL1Q9UK58 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCNL1Q9UK58 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
CCNL1Q9UK58 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCNL1Q9UK58 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC23.03■■□□□ 1.28
CCNL1Q9UK58 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCNL1Q9UK58 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
CCNL1Q9UK58 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC23.03■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms