Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00474Q9P2X8 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
LINC00474Q9P2X8 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC11.9□□□□□ -0.5
LINC00474Q9P2X8 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00474Q9P2X8 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC11.9□□□□□ -0.5
LINC00474Q9P2X8 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
LINC00474Q9P2X8 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
LINC00474Q9P2X8 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC11.9□□□□□ -0.5
LINC00474Q9P2X8 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00474Q9P2X8 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00474Q9P2X8 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
LINC00474Q9P2X8 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00474Q9P2X8 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC11.9□□□□□ -0.5
LINC00474Q9P2X8 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
LINC00474Q9P2X8 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00474Q9P2X8 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00474Q9P2X8 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00474Q9P2X8 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00474Q9P2X8 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00474Q9P2X8 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC11.9□□□□□ -0.5
LINC00474Q9P2X8 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00474Q9P2X8 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00474Q9P2X8 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC11.9□□□□□ -0.5
LINC00474Q9P2X8 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00474Q9P2X8 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
LINC00474Q9P2X8 AL137013.1-201ENST00000432946 1228 ntBASIC11.9□□□□□ -0.5
LINC00474Q9P2X8 ELP6-205ENST00000439305 880 ntTSL 2 BASIC11.9□□□□□ -0.5
LINC00474Q9P2X8 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC11.9□□□□□ -0.5
LINC00474Q9P2X8 SLC25A3P1-201ENST00000443844 931 ntBASIC11.9□□□□□ -0.5
LINC00474Q9P2X8 TSPY15P-201ENST00000457163 923 ntBASIC11.9□□□□□ -0.5
LINC00474Q9P2X8 ECEL1P2-202ENST00000465689 757 ntBASIC11.9□□□□□ -0.5
LINC00474Q9P2X8 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC11.9□□□□□ -0.5
LINC00474Q9P2X8 AC034232.1-201ENST00000506026 1064 ntBASIC11.9□□□□□ -0.5
LINC00474Q9P2X8 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC11.9□□□□□ -0.5
LINC00474Q9P2X8 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00474Q9P2X8 AC008556.1-201ENST00000610908 2040 ntBASIC11.9□□□□□ -0.5
LINC00474Q9P2X8 FAM87A-204ENST00000613235 858 ntBASIC11.9□□□□□ -0.5
LINC00474Q9P2X8 AC008622.2-201ENST00000617006 1229 ntBASIC11.9□□□□□ -0.5
LINC00474Q9P2X8 AC112497.1-201ENST00000624824 639 ntBASIC11.9□□□□□ -0.5
LINC00474Q9P2X8 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC11.9□□□□□ -0.5
LINC00474Q9P2X8 AC092865.7-201ENST00000641832 219 ntBASIC11.9□□□□□ -0.5
LINC00474Q9P2X8 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00474Q9P2X8 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00474Q9P2X8 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
LINC00474Q9P2X8 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
LINC00474Q9P2X8 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC11.9□□□□□ -0.51
LINC00474Q9P2X8 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
LINC00474Q9P2X8 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
LINC00474Q9P2X8 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC11.89□□□□□ -0.51
LINC00474Q9P2X8 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC00474Q9P2X8 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC00474Q9P2X8 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC00474Q9P2X8 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC00474Q9P2X8 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC11.89□□□□□ -0.51
LINC00474Q9P2X8 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
LINC00474Q9P2X8 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC00474Q9P2X8 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC00474Q9P2X8 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC00474Q9P2X8 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC00474Q9P2X8 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
LINC00474Q9P2X8 KRT8P45-201ENST00000414328 1447 ntBASIC11.89□□□□□ -0.51
LINC00474Q9P2X8 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
LINC00474Q9P2X8 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC00474Q9P2X8 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC00474Q9P2X8 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC11.89□□□□□ -0.51
LINC00474Q9P2X8 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC00474Q9P2X8 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
LINC00474Q9P2X8 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
LINC00474Q9P2X8 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC00474Q9P2X8 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC00474Q9P2X8 AC113347.1-201ENST00000413321 391 ntBASIC11.89□□□□□ -0.51
LINC00474Q9P2X8 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC11.89□□□□□ -0.51
LINC00474Q9P2X8 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC11.89□□□□□ -0.51
LINC00474Q9P2X8 AC140113.3-201ENST00000605663 199 ntBASIC11.89□□□□□ -0.51
LINC00474Q9P2X8 CR769767.2-201ENST00000622735 460 ntBASIC11.89□□□□□ -0.51
LINC00474Q9P2X8 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC00474Q9P2X8 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC00474Q9P2X8 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC11.89□□□□□ -0.51
LINC00474Q9P2X8 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC00474Q9P2X8 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC11.89□□□□□ -0.51
LINC00474Q9P2X8 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC00474Q9P2X8 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC00474Q9P2X8 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
LINC00474Q9P2X8 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC00474Q9P2X8 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC00474Q9P2X8 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
LINC00474Q9P2X8 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC00474Q9P2X8 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC11.89□□□□□ -0.51
LINC00474Q9P2X8 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
LINC00474Q9P2X8 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
LINC00474Q9P2X8 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
LINC00474Q9P2X8 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC00474Q9P2X8 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC11.88□□□□□ -0.51
LINC00474Q9P2X8 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
LINC00474Q9P2X8 AC036111.1-201ENST00000533973 1582 ntBASIC11.88□□□□□ -0.51
LINC00474Q9P2X8 AL357033.4-201ENST00000617703 1807 ntBASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms