Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.23■□□□□ 0.67
CHD7Q9P2D1 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHD7Q9P2D1 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.23■□□□□ 0.67
CHD7Q9P2D1 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHD7Q9P2D1 AC012645.4-201ENST00000610691 1061 ntBASIC19.23■□□□□ 0.67
CHD7Q9P2D1 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CHD7Q9P2D1 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHD7Q9P2D1 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHD7Q9P2D1 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.23■□□□□ 0.67
CHD7Q9P2D1 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHD7Q9P2D1 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.23■□□□□ 0.67
CHD7Q9P2D1 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CHD7Q9P2D1 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.23■□□□□ 0.67
CHD7Q9P2D1 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.23■□□□□ 0.67
CHD7Q9P2D1 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHD7Q9P2D1 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHD7Q9P2D1 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.23■□□□□ 0.67
CHD7Q9P2D1 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHD7Q9P2D1 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.23■□□□□ 0.67
CHD7Q9P2D1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHD7Q9P2D1 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHD7Q9P2D1 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.23■□□□□ 0.67
CHD7Q9P2D1 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
CHD7Q9P2D1 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.23■□□□□ 0.67
CHD7Q9P2D1 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
CHD7Q9P2D1 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHD7Q9P2D1 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.22■□□□□ 0.67
CHD7Q9P2D1 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CHD7Q9P2D1 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CHD7Q9P2D1 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.22■□□□□ 0.67
CHD7Q9P2D1 SNHG9-202ENST00000564014 471 ntBASIC19.22■□□□□ 0.67
CHD7Q9P2D1 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.22■□□□□ 0.67
CHD7Q9P2D1 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHD7Q9P2D1 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.22■□□□□ 0.67
CHD7Q9P2D1 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CHD7Q9P2D1 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.22■□□□□ 0.67
CHD7Q9P2D1 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.22■□□□□ 0.67
CHD7Q9P2D1 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHD7Q9P2D1 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHD7Q9P2D1 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CHD7Q9P2D1 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHD7Q9P2D1 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHD7Q9P2D1 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHD7Q9P2D1 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHD7Q9P2D1 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.21■□□□□ 0.67
CHD7Q9P2D1 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.21■□□□□ 0.67
CHD7Q9P2D1 PDPK2P-202ENST00000562415 1191 ntBASIC19.21■□□□□ 0.67
CHD7Q9P2D1 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CHD7Q9P2D1 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.21■□□□□ 0.67
CHD7Q9P2D1 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHD7Q9P2D1 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHD7Q9P2D1 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.21■□□□□ 0.67
CHD7Q9P2D1 MKNK2P1-201ENST00000437526 628 ntBASIC19.21■□□□□ 0.67
CHD7Q9P2D1 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHD7Q9P2D1 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.21■□□□□ 0.67
CHD7Q9P2D1 AL513190.1-201ENST00000621254 727 ntBASIC19.21■□□□□ 0.67
CHD7Q9P2D1 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.21■□□□□ 0.67
CHD7Q9P2D1 AC079776.2-201ENST00000641154 1609 ntBASIC19.21■□□□□ 0.67
CHD7Q9P2D1 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHD7Q9P2D1 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.21■□□□□ 0.67
CHD7Q9P2D1 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.21■□□□□ 0.67
CHD7Q9P2D1 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHD7Q9P2D1 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHD7Q9P2D1 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CHD7Q9P2D1 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.21■□□□□ 0.66
CHD7Q9P2D1 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHD7Q9P2D1 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.2■□□□□ 0.66
CHD7Q9P2D1 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.2■□□□□ 0.66
CHD7Q9P2D1 AL031432.2-201ENST00000566714 459 ntBASIC19.2■□□□□ 0.66
CHD7Q9P2D1 AL928711.1-201ENST00000570165 459 ntBASIC19.2■□□□□ 0.66
CHD7Q9P2D1 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHD7Q9P2D1 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHD7Q9P2D1 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHD7Q9P2D1 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHD7Q9P2D1 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.2■□□□□ 0.66
CHD7Q9P2D1 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHD7Q9P2D1 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHD7Q9P2D1 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.2■□□□□ 0.66
CHD7Q9P2D1 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.2■□□□□ 0.66
CHD7Q9P2D1 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHD7Q9P2D1 AC093512.1-201ENST00000617969 520 ntBASIC19.2■□□□□ 0.66
CHD7Q9P2D1 SIGLEC16-201ENST00000599858 1437 ntBASIC19.2■□□□□ 0.66
CHD7Q9P2D1 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CHD7Q9P2D1 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHD7Q9P2D1 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHD7Q9P2D1 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHD7Q9P2D1 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.2■□□□□ 0.66
CHD7Q9P2D1 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHD7Q9P2D1 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.2■□□□□ 0.66
CHD7Q9P2D1 AC136632.2-201ENST00000512891 861 ntBASIC19.2■□□□□ 0.66
CHD7Q9P2D1 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.2■□□□□ 0.66
CHD7Q9P2D1 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19.2■□□□□ 0.66
CHD7Q9P2D1 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.2■□□□□ 0.66
CHD7Q9P2D1 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHD7Q9P2D1 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CHD7Q9P2D1 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHD7Q9P2D1 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.19■□□□□ 0.66
CHD7Q9P2D1 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHD7Q9P2D1 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHD7Q9P2D1 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms