Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHD8Q9HCK8 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.83■□□□□ 0.28
CHD8Q9HCK8 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.83■□□□□ 0.28
CHD8Q9HCK8 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.83■□□□□ 0.28
CHD8Q9HCK8 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.83■□□□□ 0.28
CHD8Q9HCK8 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.83■□□□□ 0.28
CHD8Q9HCK8 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
CHD8Q9HCK8 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.83■□□□□ 0.28
CHD8Q9HCK8 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.83■□□□□ 0.28
CHD8Q9HCK8 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC16.83■□□□□ 0.28
CHD8Q9HCK8 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.83■□□□□ 0.28
CHD8Q9HCK8 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHD8Q9HCK8 U91328.1-201ENST00000437528 223 ntBASIC16.83■□□□□ 0.28
CHD8Q9HCK8 GPR53P-205ENST00000457298 1084 ntBASIC16.83■□□□□ 0.28
CHD8Q9HCK8 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.83■□□□□ 0.28
CHD8Q9HCK8 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHD8Q9HCK8 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.83■□□□□ 0.28
CHD8Q9HCK8 AC009093.7-201ENST00000623853 1223 ntBASIC16.83■□□□□ 0.28
CHD8Q9HCK8 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CHD8Q9HCK8 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.83■□□□□ 0.28
CHD8Q9HCK8 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHD8Q9HCK8 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHD8Q9HCK8 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CHD8Q9HCK8 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CHD8Q9HCK8 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHD8Q9HCK8 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.82■□□□□ 0.28
CHD8Q9HCK8 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.82■□□□□ 0.28
CHD8Q9HCK8 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHD8Q9HCK8 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.82■□□□□ 0.28
CHD8Q9HCK8 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHD8Q9HCK8 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHD8Q9HCK8 AC092667.1-201ENST00000434301 2586 ntBASIC16.82■□□□□ 0.28
CHD8Q9HCK8 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CHD8Q9HCK8 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.82■□□□□ 0.28
CHD8Q9HCK8 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.82■□□□□ 0.28
CHD8Q9HCK8 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CHD8Q9HCK8 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.82■□□□□ 0.28
CHD8Q9HCK8 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHD8Q9HCK8 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CHD8Q9HCK8 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.82■□□□□ 0.28
CHD8Q9HCK8 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CHD8Q9HCK8 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.82■□□□□ 0.28
CHD8Q9HCK8 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHD8Q9HCK8 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CHD8Q9HCK8 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHD8Q9HCK8 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHD8Q9HCK8 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.82■□□□□ 0.28
CHD8Q9HCK8 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.82■□□□□ 0.28
CHD8Q9HCK8 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.82■□□□□ 0.28
CHD8Q9HCK8 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.82■□□□□ 0.28
CHD8Q9HCK8 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.82■□□□□ 0.28
CHD8Q9HCK8 OR7E47P-204ENST00000575924 449 ntBASIC16.82■□□□□ 0.28
CHD8Q9HCK8 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.82■□□□□ 0.28
CHD8Q9HCK8 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.82■□□□□ 0.28
CHD8Q9HCK8 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.81■□□□□ 0.28
CHD8Q9HCK8 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.81■□□□□ 0.28
CHD8Q9HCK8 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHD8Q9HCK8 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHD8Q9HCK8 CU639417.3-201ENST00000624240 1404 ntBASIC16.81■□□□□ 0.28
CHD8Q9HCK8 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHD8Q9HCK8 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHD8Q9HCK8 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CHD8Q9HCK8 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.81■□□□□ 0.28
CHD8Q9HCK8 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHD8Q9HCK8 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.81■□□□□ 0.28
CHD8Q9HCK8 SERBP1P5-201ENST00000510079 1181 ntBASIC16.81■□□□□ 0.28
CHD8Q9HCK8 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHD8Q9HCK8 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.81■□□□□ 0.28
CHD8Q9HCK8 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHD8Q9HCK8 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHD8Q9HCK8 AC107890.1-201ENST00000422478 521 ntBASIC16.81■□□□□ 0.28
CHD8Q9HCK8 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.81■□□□□ 0.28
CHD8Q9HCK8 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.81■□□□□ 0.28
CHD8Q9HCK8 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.81■□□□□ 0.28
CHD8Q9HCK8 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.81■□□□□ 0.28
CHD8Q9HCK8 AL512356.2-201ENST00000546955 174 ntBASIC16.81■□□□□ 0.28
CHD8Q9HCK8 AC068137.2-201ENST00000605408 478 ntBASIC16.81■□□□□ 0.28
CHD8Q9HCK8 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CHD8Q9HCK8 AL390754.1-201ENST00000619088 582 ntBASIC16.81■□□□□ 0.28
CHD8Q9HCK8 IGHV3-72-202ENST00000621503 303 ntBASIC16.81■□□□□ 0.28
CHD8Q9HCK8 BCAR1-209ENST00000546196 1340 ntBASIC16.8■□□□□ 0.28
CHD8Q9HCK8 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHD8Q9HCK8 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CHD8Q9HCK8 KRT8P32-201ENST00000512863 1461 ntBASIC16.8■□□□□ 0.28
CHD8Q9HCK8 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHD8Q9HCK8 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHD8Q9HCK8 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC16.8■□□□□ 0.28
CHD8Q9HCK8 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC16.8■□□□□ 0.28
CHD8Q9HCK8 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHD8Q9HCK8 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHD8Q9HCK8 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHD8Q9HCK8 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.8■□□□□ 0.28
CHD8Q9HCK8 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.8■□□□□ 0.28
CHD8Q9HCK8 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.8■□□□□ 0.28
CHD8Q9HCK8 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.8■□□□□ 0.28
CHD8Q9HCK8 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CHD8Q9HCK8 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CHD8Q9HCK8 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHD8Q9HCK8 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHD8Q9HCK8 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms