Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
UPF3BQ9BZI7 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
UPF3BQ9BZI7 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
UPF3BQ9BZI7 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
UPF3BQ9BZI7 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
UPF3BQ9BZI7 KRT8P7-201ENST00000533003 1432 ntBASIC21.74■■□□□ 1.07
UPF3BQ9BZI7 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
UPF3BQ9BZI7 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.74■■□□□ 1.07
UPF3BQ9BZI7 GXYLT1P6-201ENST00000456472 1187 ntBASIC21.74■■□□□ 1.07
UPF3BQ9BZI7 FAM87A-204ENST00000613235 858 ntBASIC21.74■■□□□ 1.07
UPF3BQ9BZI7 AC010653.2-201ENST00000623505 997 ntBASIC21.74■■□□□ 1.07
UPF3BQ9BZI7 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
UPF3BQ9BZI7 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
UPF3BQ9BZI7 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
UPF3BQ9BZI7 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
UPF3BQ9BZI7 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
UPF3BQ9BZI7 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
UPF3BQ9BZI7 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
UPF3BQ9BZI7 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
UPF3BQ9BZI7 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
UPF3BQ9BZI7 FLJ13224-201ENST00000313737 1514 ntBASIC21.74■■□□□ 1.07
UPF3BQ9BZI7 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
UPF3BQ9BZI7 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
UPF3BQ9BZI7 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
UPF3BQ9BZI7 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
UPF3BQ9BZI7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
UPF3BQ9BZI7 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
UPF3BQ9BZI7 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
UPF3BQ9BZI7 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
UPF3BQ9BZI7 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
UPF3BQ9BZI7 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
UPF3BQ9BZI7 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
UPF3BQ9BZI7 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
UPF3BQ9BZI7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
UPF3BQ9BZI7 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
UPF3BQ9BZI7 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
UPF3BQ9BZI7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
UPF3BQ9BZI7 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
UPF3BQ9BZI7 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
UPF3BQ9BZI7 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
UPF3BQ9BZI7 ECEL1P2-202ENST00000465689 757 ntBASIC21.73■■□□□ 1.07
UPF3BQ9BZI7 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.73■■□□□ 1.07
UPF3BQ9BZI7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.73■■□□□ 1.07
UPF3BQ9BZI7 AC104390.1-201ENST00000555663 520 ntBASIC21.73■■□□□ 1.07
UPF3BQ9BZI7 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.73■■□□□ 1.07
UPF3BQ9BZI7 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.73■■□□□ 1.07
UPF3BQ9BZI7 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC21.73■■□□□ 1.07
UPF3BQ9BZI7 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
UPF3BQ9BZI7 EML3-212ENST00000494176 2901 ntTSL 2 BASIC21.73■■□□□ 1.07
UPF3BQ9BZI7 EML3-216ENST00000529309 2909 ntTSL 2 BASIC21.73■■□□□ 1.07
UPF3BQ9BZI7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.73■■□□□ 1.07
UPF3BQ9BZI7 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
UPF3BQ9BZI7 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
UPF3BQ9BZI7 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC21.73■■□□□ 1.07
UPF3BQ9BZI7 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
UPF3BQ9BZI7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC21.73■■□□□ 1.07
UPF3BQ9BZI7 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
UPF3BQ9BZI7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
UPF3BQ9BZI7 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC21.72■■□□□ 1.07
UPF3BQ9BZI7 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
UPF3BQ9BZI7 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
UPF3BQ9BZI7 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
UPF3BQ9BZI7 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC21.72■■□□□ 1.07
UPF3BQ9BZI7 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
UPF3BQ9BZI7 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
UPF3BQ9BZI7 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC21.72■■□□□ 1.07
UPF3BQ9BZI7 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
UPF3BQ9BZI7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
UPF3BQ9BZI7 TMPOP1-202ENST00000424642 1267 ntBASIC21.72■■□□□ 1.07
UPF3BQ9BZI7 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
UPF3BQ9BZI7 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.72■■□□□ 1.07
UPF3BQ9BZI7 NAPSB-206ENST00000562112 1266 ntBASIC21.72■■□□□ 1.07
UPF3BQ9BZI7 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
UPF3BQ9BZI7 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
UPF3BQ9BZI7 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
UPF3BQ9BZI7 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
UPF3BQ9BZI7 AL024508.2-201ENST00000607749 1894 ntBASIC21.72■■□□□ 1.07
UPF3BQ9BZI7 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
UPF3BQ9BZI7 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
UPF3BQ9BZI7 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
UPF3BQ9BZI7 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
UPF3BQ9BZI7 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
UPF3BQ9BZI7 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
UPF3BQ9BZI7 FST-202ENST00000396947 2538 ntTSL 5 BASIC21.71■■□□□ 1.07
UPF3BQ9BZI7 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
UPF3BQ9BZI7 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
UPF3BQ9BZI7 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC21.71■■□□□ 1.07
UPF3BQ9BZI7 AC012317.2-201ENST00000623305 2251 ntBASIC21.71■■□□□ 1.07
UPF3BQ9BZI7 MMP23A-201ENST00000234610 1017 ntBASIC21.71■■□□□ 1.07
UPF3BQ9BZI7 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
UPF3BQ9BZI7 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.71■■□□□ 1.07
UPF3BQ9BZI7 AC009947.2-201ENST00000444014 672 ntBASIC21.71■■□□□ 1.07
UPF3BQ9BZI7 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
UPF3BQ9BZI7 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC21.71■■□□□ 1.07
UPF3BQ9BZI7 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
UPF3BQ9BZI7 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.71■■□□□ 1.07
UPF3BQ9BZI7 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
UPF3BQ9BZI7 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC21.71■■□□□ 1.07
UPF3BQ9BZI7 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
UPF3BQ9BZI7 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms