Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
RTFDC1Q9BY42 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RTFDC1Q9BY42 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
RTFDC1Q9BY42 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC22.06■■□□□ 1.12
RTFDC1Q9BY42 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RTFDC1Q9BY42 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RTFDC1Q9BY42 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC22.05■■□□□ 1.12
RTFDC1Q9BY42 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC22.05■■□□□ 1.12
RTFDC1Q9BY42 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RTFDC1Q9BY42 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC22.05■■□□□ 1.12
RTFDC1Q9BY42 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
RTFDC1Q9BY42 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RTFDC1Q9BY42 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC22.05■■□□□ 1.12
RTFDC1Q9BY42 UNC93B6-202ENST00000528242 690 ntBASIC22.05■■□□□ 1.12
RTFDC1Q9BY42 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RTFDC1Q9BY42 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RTFDC1Q9BY42 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RTFDC1Q9BY42 AP001160.2-201ENST00000596071 487 ntBASIC22.05■■□□□ 1.12
RTFDC1Q9BY42 MTDHP4-201ENST00000600287 670 ntBASIC22.05■■□□□ 1.12
RTFDC1Q9BY42 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RTFDC1Q9BY42 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC22.05■■□□□ 1.12
RTFDC1Q9BY42 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RTFDC1Q9BY42 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
RTFDC1Q9BY42 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RTFDC1Q9BY42 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC22.05■■□□□ 1.12
RTFDC1Q9BY42 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RTFDC1Q9BY42 ADK-206ENST00000541550 2222 ntTSL 2 BASIC22.04■■□□□ 1.12
RTFDC1Q9BY42 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RTFDC1Q9BY42 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
RTFDC1Q9BY42 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC22.04■■□□□ 1.12
RTFDC1Q9BY42 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RTFDC1Q9BY42 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RTFDC1Q9BY42 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
RTFDC1Q9BY42 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC22.04■■□□□ 1.12
RTFDC1Q9BY42 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC22.04■■□□□ 1.12
RTFDC1Q9BY42 CD9-202ENST00000382515 1229 ntTSL 5 BASIC22.04■■□□□ 1.12
RTFDC1Q9BY42 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC22.04■■□□□ 1.12
RTFDC1Q9BY42 CENPM-204ENST00000402420 688 ntTSL 5 BASIC22.04■■□□□ 1.12
RTFDC1Q9BY42 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
RTFDC1Q9BY42 KIRREL3-AS3-201ENST00000404882 831 ntBASIC22.04■■□□□ 1.12
RTFDC1Q9BY42 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC22.04■■□□□ 1.12
RTFDC1Q9BY42 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC22.04■■□□□ 1.12
RTFDC1Q9BY42 AC112482.1-201ENST00000492080 688 ntBASIC22.04■■□□□ 1.12
RTFDC1Q9BY42 AC112698.1-201ENST00000510299 916 ntBASIC22.04■■□□□ 1.12
RTFDC1Q9BY42 AC040169.1-201ENST00000565382 521 ntBASIC22.04■■□□□ 1.12
RTFDC1Q9BY42 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC22.04■■□□□ 1.12
RTFDC1Q9BY42 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC22.04■■□□□ 1.12
RTFDC1Q9BY42 AC010327.4-202ENST00000591484 748 ntBASIC22.04■■□□□ 1.12
RTFDC1Q9BY42 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC22.04■■□□□ 1.12
RTFDC1Q9BY42 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
RTFDC1Q9BY42 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RTFDC1Q9BY42 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC22.04■■□□□ 1.12
RTFDC1Q9BY42 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC22.04■■□□□ 1.12
RTFDC1Q9BY42 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RTFDC1Q9BY42 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC22.03■■□□□ 1.12
RTFDC1Q9BY42 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
RTFDC1Q9BY42 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RTFDC1Q9BY42 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC22.03■■□□□ 1.12
RTFDC1Q9BY42 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RTFDC1Q9BY42 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC22.03■■□□□ 1.12
RTFDC1Q9BY42 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RTFDC1Q9BY42 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RTFDC1Q9BY42 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RTFDC1Q9BY42 INIP-202ENST00000374236 874 ntTSL 2 BASIC22.03■■□□□ 1.12
RTFDC1Q9BY42 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RTFDC1Q9BY42 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC22.03■■□□□ 1.12
RTFDC1Q9BY42 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC22.03■■□□□ 1.12
RTFDC1Q9BY42 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC22.03■■□□□ 1.12
RTFDC1Q9BY42 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RTFDC1Q9BY42 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC22.03■■□□□ 1.12
RTFDC1Q9BY42 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RTFDC1Q9BY42 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RTFDC1Q9BY42 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC22.03■■□□□ 1.12
RTFDC1Q9BY42 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
RTFDC1Q9BY42 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RTFDC1Q9BY42 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
RTFDC1Q9BY42 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
RTFDC1Q9BY42 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
RTFDC1Q9BY42 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
RTFDC1Q9BY42 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC22.02■■□□□ 1.12
RTFDC1Q9BY42 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC22.02■■□□□ 1.12
RTFDC1Q9BY42 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
RTFDC1Q9BY42 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
RTFDC1Q9BY42 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RTFDC1Q9BY42 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC22.02■■□□□ 1.12
RTFDC1Q9BY42 SNCG-201ENST00000348795 684 ntTSL 2 BASIC22.02■■□□□ 1.12
RTFDC1Q9BY42 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RTFDC1Q9BY42 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC22.02■■□□□ 1.12
RTFDC1Q9BY42 SRP19-202ENST00000445150 833 ntTSL 2 BASIC22.02■■□□□ 1.12
RTFDC1Q9BY42 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC22.02■■□□□ 1.12
RTFDC1Q9BY42 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC22.02■■□□□ 1.12
RTFDC1Q9BY42 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC22.02■■□□□ 1.12
RTFDC1Q9BY42 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC22.02■■□□□ 1.12
RTFDC1Q9BY42 AL139424.1-201ENST00000607572 797 ntBASIC22.02■■□□□ 1.12
RTFDC1Q9BY42 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RTFDC1Q9BY42 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RTFDC1Q9BY42 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
RTFDC1Q9BY42 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC22.02■■□□□ 1.12
RTFDC1Q9BY42 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC22.02■■□□□ 1.12
RTFDC1Q9BY42 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms