Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
VGLL1Q99990 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VGLL1Q99990 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VGLL1Q99990 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VGLL1Q99990 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
VGLL1Q99990 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
VGLL1Q99990 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VGLL1Q99990 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VGLL1Q99990 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC13.84□□□□□ -0.19
VGLL1Q99990 AL096828.2-201ENST00000567259 1965 ntBASIC13.84□□□□□ -0.19
VGLL1Q99990 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC13.84□□□□□ -0.19
VGLL1Q99990 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC13.84□□□□□ -0.19
VGLL1Q99990 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC13.84□□□□□ -0.19
VGLL1Q99990 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VGLL1Q99990 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC13.84□□□□□ -0.19
VGLL1Q99990 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC13.84□□□□□ -0.19
VGLL1Q99990 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VGLL1Q99990 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC13.84□□□□□ -0.19
VGLL1Q99990 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VGLL1Q99990 AF186192.3-201ENST00000583427 947 ntBASIC13.84□□□□□ -0.19
VGLL1Q99990 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC13.84□□□□□ -0.19
VGLL1Q99990 MIR6786-201ENST00000616843 113 ntBASIC13.84□□□□□ -0.19
VGLL1Q99990 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
VGLL1Q99990 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VGLL1Q99990 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
VGLL1Q99990 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
VGLL1Q99990 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC13.84□□□□□ -0.19
VGLL1Q99990 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VGLL1Q99990 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VGLL1Q99990 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VGLL1Q99990 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC13.84□□□□□ -0.19
VGLL1Q99990 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
VGLL1Q99990 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VGLL1Q99990 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
VGLL1Q99990 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
VGLL1Q99990 FLJ13224-201ENST00000313737 1514 ntBASIC13.84□□□□□ -0.19
VGLL1Q99990 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
VGLL1Q99990 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
VGLL1Q99990 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VGLL1Q99990 GMCL1P1-201ENST00000463439 1581 ntBASIC13.83□□□□□ -0.19
VGLL1Q99990 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC13.83□□□□□ -0.19
VGLL1Q99990 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.19
VGLL1Q99990 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.19
VGLL1Q99990 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VGLL1Q99990 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VGLL1Q99990 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC13.83□□□□□ -0.2
VGLL1Q99990 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
VGLL1Q99990 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VGLL1Q99990 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
VGLL1Q99990 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VGLL1Q99990 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
VGLL1Q99990 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VGLL1Q99990 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VGLL1Q99990 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC13.83□□□□□ -0.2
VGLL1Q99990 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VGLL1Q99990 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VGLL1Q99990 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC13.83□□□□□ -0.2
VGLL1Q99990 MIR564-202ENST00000385049 94 ntBASIC13.83□□□□□ -0.2
VGLL1Q99990 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC13.83□□□□□ -0.2
VGLL1Q99990 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
VGLL1Q99990 B3GAT3P1-201ENST00000471720 806 ntBASIC13.83□□□□□ -0.2
VGLL1Q99990 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC13.83□□□□□ -0.2
VGLL1Q99990 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
VGLL1Q99990 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC13.83□□□□□ -0.2
VGLL1Q99990 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC13.83□□□□□ -0.2
VGLL1Q99990 AC073195.1-201ENST00000607241 877 ntBASIC13.83□□□□□ -0.2
VGLL1Q99990 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
VGLL1Q99990 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC13.83□□□□□ -0.2
VGLL1Q99990 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VGLL1Q99990 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VGLL1Q99990 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
VGLL1Q99990 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
VGLL1Q99990 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
VGLL1Q99990 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
VGLL1Q99990 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
VGLL1Q99990 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC13.83□□□□□ -0.2
VGLL1Q99990 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VGLL1Q99990 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VGLL1Q99990 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VGLL1Q99990 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VGLL1Q99990 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VGLL1Q99990 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VGLL1Q99990 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
VGLL1Q99990 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
VGLL1Q99990 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
VGLL1Q99990 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VGLL1Q99990 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
VGLL1Q99990 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VGLL1Q99990 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
VGLL1Q99990 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VGLL1Q99990 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
VGLL1Q99990 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VGLL1Q99990 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC13.82□□□□□ -0.2
VGLL1Q99990 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VGLL1Q99990 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
VGLL1Q99990 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VGLL1Q99990 AP000593.1-201ENST00000393668 712 ntBASIC13.82□□□□□ -0.2
VGLL1Q99990 AL023284.2-201ENST00000405850 579 ntBASIC13.82□□□□□ -0.2
VGLL1Q99990 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
VGLL1Q99990 AC128676.1-201ENST00000454392 318 ntBASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms