Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNTNAP3BQ96NU0 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNTNAP3BQ96NU0 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.38■□□□□ 0.37
CNTNAP3BQ96NU0 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CNTNAP3BQ96NU0 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CNTNAP3BQ96NU0 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
CNTNAP3BQ96NU0 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.37■□□□□ 0.37
CNTNAP3BQ96NU0 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNTNAP3BQ96NU0 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.37■□□□□ 0.37
CNTNAP3BQ96NU0 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CNTNAP3BQ96NU0 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.37■□□□□ 0.37
CNTNAP3BQ96NU0 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.37■□□□□ 0.37
CNTNAP3BQ96NU0 PMS2P4-201ENST00000412466 1052 ntBASIC17.37■□□□□ 0.37
CNTNAP3BQ96NU0 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.37■□□□□ 0.37
CNTNAP3BQ96NU0 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.37■□□□□ 0.37
CNTNAP3BQ96NU0 TERF1P3-201ENST00000505638 1227 ntBASIC17.37■□□□□ 0.37
CNTNAP3BQ96NU0 PARP8-218ENST00000513738 596 ntTSL 4 BASIC17.37■□□□□ 0.37
CNTNAP3BQ96NU0 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.37■□□□□ 0.37
CNTNAP3BQ96NU0 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNTNAP3BQ96NU0 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.37■□□□□ 0.37
CNTNAP3BQ96NU0 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.37■□□□□ 0.37
CNTNAP3BQ96NU0 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNTNAP3BQ96NU0 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CNTNAP3BQ96NU0 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.37■□□□□ 0.37
CNTNAP3BQ96NU0 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CNTNAP3BQ96NU0 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CNTNAP3BQ96NU0 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CNTNAP3BQ96NU0 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CNTNAP3BQ96NU0 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CNTNAP3BQ96NU0 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNTNAP3BQ96NU0 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.37■□□□□ 0.37
CNTNAP3BQ96NU0 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CNTNAP3BQ96NU0 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNTNAP3BQ96NU0 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.37■□□□□ 0.37
CNTNAP3BQ96NU0 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNTNAP3BQ96NU0 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CNTNAP3BQ96NU0 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
CNTNAP3BQ96NU0 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CNTNAP3BQ96NU0 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.36■□□□□ 0.37
CNTNAP3BQ96NU0 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CNTNAP3BQ96NU0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CNTNAP3BQ96NU0 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.36■□□□□ 0.37
CNTNAP3BQ96NU0 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNTNAP3BQ96NU0 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CNTNAP3BQ96NU0 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.36■□□□□ 0.37
CNTNAP3BQ96NU0 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
CNTNAP3BQ96NU0 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
CNTNAP3BQ96NU0 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.36■□□□□ 0.37
CNTNAP3BQ96NU0 MKNK2P1-201ENST00000437526 628 ntBASIC17.36■□□□□ 0.37
CNTNAP3BQ96NU0 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CNTNAP3BQ96NU0 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.36■□□□□ 0.37
CNTNAP3BQ96NU0 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.36■□□□□ 0.37
CNTNAP3BQ96NU0 MIR6799-201ENST00000620297 69 ntBASIC17.36■□□□□ 0.37
CNTNAP3BQ96NU0 AC092865.6-201ENST00000642101 219 ntBASIC17.36■□□□□ 0.37
CNTNAP3BQ96NU0 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNTNAP3BQ96NU0 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNTNAP3BQ96NU0 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
CNTNAP3BQ96NU0 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNTNAP3BQ96NU0 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
CNTNAP3BQ96NU0 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNTNAP3BQ96NU0 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.36■□□□□ 0.37
CNTNAP3BQ96NU0 TP73-AS1-210ENST00000637775 1455 ntBASIC17.36■□□□□ 0.37
CNTNAP3BQ96NU0 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNTNAP3BQ96NU0 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CNTNAP3BQ96NU0 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.36■□□□□ 0.37
CNTNAP3BQ96NU0 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNTNAP3BQ96NU0 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CNTNAP3BQ96NU0 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNTNAP3BQ96NU0 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNTNAP3BQ96NU0 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.35■□□□□ 0.37
CNTNAP3BQ96NU0 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNTNAP3BQ96NU0 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNTNAP3BQ96NU0 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.35■□□□□ 0.37
CNTNAP3BQ96NU0 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNTNAP3BQ96NU0 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNTNAP3BQ96NU0 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNTNAP3BQ96NU0 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.35■□□□□ 0.37
CNTNAP3BQ96NU0 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.35■□□□□ 0.37
CNTNAP3BQ96NU0 RNA5SP421-201ENST00000516864 134 ntBASIC17.35■□□□□ 0.37
CNTNAP3BQ96NU0 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.35■□□□□ 0.37
CNTNAP3BQ96NU0 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.35■□□□□ 0.37
CNTNAP3BQ96NU0 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.35■□□□□ 0.37
CNTNAP3BQ96NU0 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CNTNAP3BQ96NU0 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.35■□□□□ 0.37
CNTNAP3BQ96NU0 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.35■□□□□ 0.37
CNTNAP3BQ96NU0 AC097374.2-201ENST00000618617 1306 ntBASIC17.35■□□□□ 0.37
CNTNAP3BQ96NU0 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNTNAP3BQ96NU0 AP005117.1-201ENST00000584346 1413 ntBASIC17.35■□□□□ 0.37
CNTNAP3BQ96NU0 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CNTNAP3BQ96NU0 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CNTNAP3BQ96NU0 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CNTNAP3BQ96NU0 AC121338.2-201ENST00000622535 1744 ntBASIC17.35■□□□□ 0.37
CNTNAP3BQ96NU0 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CNTNAP3BQ96NU0 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.35■□□□□ 0.37
CNTNAP3BQ96NU0 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNTNAP3BQ96NU0 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.35■□□□□ 0.37
CNTNAP3BQ96NU0 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CNTNAP3BQ96NU0 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.34■□□□□ 0.37
CNTNAP3BQ96NU0 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNTNAP3BQ96NU0 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms