Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CFAP54Q96N23 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CFAP54Q96N23 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CFAP54Q96N23 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CFAP54Q96N23 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CFAP54Q96N23 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CFAP54Q96N23 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CFAP54Q96N23 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.78■□□□□ 0.44
CFAP54Q96N23 INGX-202ENST00000489074 768 ntBASIC17.78■□□□□ 0.44
CFAP54Q96N23 AC015911.4-201ENST00000588022 1070 ntBASIC17.78■□□□□ 0.44
CFAP54Q96N23 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.78■□□□□ 0.44
CFAP54Q96N23 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CFAP54Q96N23 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CFAP54Q96N23 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
CFAP54Q96N23 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.77■□□□□ 0.44
CFAP54Q96N23 PMS2P4-201ENST00000412466 1052 ntBASIC17.77■□□□□ 0.44
CFAP54Q96N23 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CFAP54Q96N23 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.77■□□□□ 0.44
CFAP54Q96N23 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.77■□□□□ 0.44
CFAP54Q96N23 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.77■□□□□ 0.44
CFAP54Q96N23 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CFAP54Q96N23 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CFAP54Q96N23 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.43
CFAP54Q96N23 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.77■□□□□ 0.43
CFAP54Q96N23 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.77■□□□□ 0.43
CFAP54Q96N23 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
CFAP54Q96N23 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.77■□□□□ 0.43
CFAP54Q96N23 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CFAP54Q96N23 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CFAP54Q96N23 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CFAP54Q96N23 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CFAP54Q96N23 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CFAP54Q96N23 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.76■□□□□ 0.43
CFAP54Q96N23 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CFAP54Q96N23 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.76■□□□□ 0.43
CFAP54Q96N23 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.76■□□□□ 0.43
CFAP54Q96N23 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.76■□□□□ 0.43
CFAP54Q96N23 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.76■□□□□ 0.43
CFAP54Q96N23 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CFAP54Q96N23 KRT89P-201ENST00000620027 1478 ntBASIC17.76■□□□□ 0.43
CFAP54Q96N23 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.76■□□□□ 0.43
CFAP54Q96N23 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.76■□□□□ 0.43
CFAP54Q96N23 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CFAP54Q96N23 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CFAP54Q96N23 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CFAP54Q96N23 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CFAP54Q96N23 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.76■□□□□ 0.43
CFAP54Q96N23 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CFAP54Q96N23 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CFAP54Q96N23 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CFAP54Q96N23 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.76■□□□□ 0.43
CFAP54Q96N23 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
CFAP54Q96N23 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.76■□□□□ 0.43
CFAP54Q96N23 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CFAP54Q96N23 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
CFAP54Q96N23 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CFAP54Q96N23 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CFAP54Q96N23 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CFAP54Q96N23 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CFAP54Q96N23 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CFAP54Q96N23 AC004945.1-201ENST00000416738 983 ntBASIC17.75■□□□□ 0.43
CFAP54Q96N23 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.75■□□□□ 0.43
CFAP54Q96N23 AC025048.6-201ENST00000634326 1161 ntBASIC17.75■□□□□ 0.43
CFAP54Q96N23 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.75■□□□□ 0.43
CFAP54Q96N23 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CFAP54Q96N23 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CFAP54Q96N23 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CFAP54Q96N23 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CFAP54Q96N23 SLC25A6P5-201ENST00000435663 894 ntBASIC17.75■□□□□ 0.43
CFAP54Q96N23 PARP8-218ENST00000513738 596 ntTSL 4 BASIC17.75■□□□□ 0.43
CFAP54Q96N23 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.75■□□□□ 0.43
CFAP54Q96N23 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.75■□□□□ 0.43
CFAP54Q96N23 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.75■□□□□ 0.43
CFAP54Q96N23 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.75■□□□□ 0.43
CFAP54Q96N23 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.75■□□□□ 0.43
CFAP54Q96N23 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
CFAP54Q96N23 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.75■□□□□ 0.43
CFAP54Q96N23 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
CFAP54Q96N23 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.75■□□□□ 0.43
CFAP54Q96N23 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.75■□□□□ 0.43
CFAP54Q96N23 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CFAP54Q96N23 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CFAP54Q96N23 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CFAP54Q96N23 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CFAP54Q96N23 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CFAP54Q96N23 LINC01521-201ENST00000504184 1943 ntBASIC17.75■□□□□ 0.43
CFAP54Q96N23 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CFAP54Q96N23 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CFAP54Q96N23 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CFAP54Q96N23 NME2P1-201ENST00000426182 414 ntBASIC17.75■□□□□ 0.43
CFAP54Q96N23 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CFAP54Q96N23 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.75■□□□□ 0.43
CFAP54Q96N23 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.75■□□□□ 0.43
CFAP54Q96N23 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CFAP54Q96N23 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.75■□□□□ 0.43
CFAP54Q96N23 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CFAP54Q96N23 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CFAP54Q96N23 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CFAP54Q96N23 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CFAP54Q96N23 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms