Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 NEFHP1-201ENST00000412845 2629 ntBASIC23.38■■□□□ 1.33
ZNF428Q96B54 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
ZNF428Q96B54 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
ZNF428Q96B54 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
ZNF428Q96B54 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
ZNF428Q96B54 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
ZNF428Q96B54 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC23.37■■□□□ 1.33
ZNF428Q96B54 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
ZNF428Q96B54 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ZNF428Q96B54 Z83836.1-201ENST00000624605 1642 ntBASIC23.37■■□□□ 1.33
ZNF428Q96B54 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
ZNF428Q96B54 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
ZNF428Q96B54 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
ZNF428Q96B54 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
ZNF428Q96B54 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
ZNF428Q96B54 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ZNF428Q96B54 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC23.37■■□□□ 1.33
ZNF428Q96B54 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ZNF428Q96B54 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ZNF428Q96B54 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
ZNF428Q96B54 UNC93B7-201ENST00000509439 705 ntBASIC23.37■■□□□ 1.33
ZNF428Q96B54 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC23.37■■□□□ 1.33
ZNF428Q96B54 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC23.37■■□□□ 1.33
ZNF428Q96B54 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC23.37■■□□□ 1.33
ZNF428Q96B54 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
ZNF428Q96B54 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
ZNF428Q96B54 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
ZNF428Q96B54 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ZNF428Q96B54 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
ZNF428Q96B54 FLJ13224-201ENST00000313737 1514 ntBASIC23.37■■□□□ 1.33
ZNF428Q96B54 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
ZNF428Q96B54 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
ZNF428Q96B54 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ZNF428Q96B54 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
ZNF428Q96B54 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
ZNF428Q96B54 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ZNF428Q96B54 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
ZNF428Q96B54 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ZNF428Q96B54 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC23.36■■□□□ 1.33
ZNF428Q96B54 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC23.36■■□□□ 1.33
ZNF428Q96B54 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
ZNF428Q96B54 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
ZNF428Q96B54 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC23.36■■□□□ 1.33
ZNF428Q96B54 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
ZNF428Q96B54 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
ZNF428Q96B54 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
ZNF428Q96B54 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC23.36■■□□□ 1.33
ZNF428Q96B54 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
ZNF428Q96B54 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ZNF428Q96B54 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
ZNF428Q96B54 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC23.36■■□□□ 1.33
ZNF428Q96B54 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
ZNF428Q96B54 AL121672.3-201ENST00000608644 468 ntBASIC23.36■■□□□ 1.33
ZNF428Q96B54 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC23.36■■□□□ 1.33
ZNF428Q96B54 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC23.36■■□□□ 1.33
ZNF428Q96B54 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC23.36■■□□□ 1.33
ZNF428Q96B54 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
ZNF428Q96B54 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC23.35■■□□□ 1.33
ZNF428Q96B54 LINC00167-201ENST00000530583 1419 ntBASIC23.35■■□□□ 1.33
ZNF428Q96B54 NARF-204ENST00000390006 1766 ntTSL 2 BASIC23.35■■□□□ 1.33
ZNF428Q96B54 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ZNF428Q96B54 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC23.35■■□□□ 1.33
ZNF428Q96B54 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ZNF428Q96B54 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC23.35■■□□□ 1.33
ZNF428Q96B54 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
ZNF428Q96B54 SLC25A6P5-201ENST00000435663 894 ntBASIC23.35■■□□□ 1.33
ZNF428Q96B54 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC23.35■■□□□ 1.33
ZNF428Q96B54 NAA38-203ENST00000575071 553 ntTSL 2 BASIC23.35■■□□□ 1.33
ZNF428Q96B54 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC23.35■■□□□ 1.33
ZNF428Q96B54 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC23.35■■□□□ 1.33
ZNF428Q96B54 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
ZNF428Q96B54 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
ZNF428Q96B54 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ZNF428Q96B54 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ZNF428Q96B54 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
ZNF428Q96B54 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC23.35■■□□□ 1.33
ZNF428Q96B54 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
ZNF428Q96B54 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
ZNF428Q96B54 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
ZNF428Q96B54 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ZNF428Q96B54 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC23.34■■□□□ 1.33
ZNF428Q96B54 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ZNF428Q96B54 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
ZNF428Q96B54 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
ZNF428Q96B54 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ZNF428Q96B54 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ZNF428Q96B54 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
ZNF428Q96B54 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC23.34■■□□□ 1.33
ZNF428Q96B54 PP7080-204ENST00000510714 601 ntTSL 3 BASIC23.34■■□□□ 1.33
ZNF428Q96B54 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC23.34■■□□□ 1.33
ZNF428Q96B54 MPI-205ENST00000562606 1052 ntTSL 3 BASIC23.34■■□□□ 1.33
ZNF428Q96B54 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC23.34■■□□□ 1.33
ZNF428Q96B54 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
ZNF428Q96B54 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
ZNF428Q96B54 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC23.34■■□□□ 1.33
ZNF428Q96B54 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC23.34■■□□□ 1.33
ZNF428Q96B54 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
ZNF428Q96B54 KRT18P1-202ENST00000452408 1331 ntBASIC23.33■■□□□ 1.33
ZNF428Q96B54 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
ZNF428Q96B54 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC23.33■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms