Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.79■□□□□ 0.12
USP9XQ93008 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.79■□□□□ 0.12
USP9XQ93008 MRPL20P1-201ENST00000400819 433 ntBASIC15.79■□□□□ 0.12
USP9XQ93008 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.79■□□□□ 0.12
USP9XQ93008 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
USP9XQ93008 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.79■□□□□ 0.12
USP9XQ93008 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.79■□□□□ 0.12
USP9XQ93008 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.79■□□□□ 0.12
USP9XQ93008 AP000867.4-201ENST00000641616 219 ntBASIC15.79■□□□□ 0.12
USP9XQ93008 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
USP9XQ93008 AC079776.2-201ENST00000641154 1609 ntBASIC15.78■□□□□ 0.12
USP9XQ93008 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
USP9XQ93008 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
USP9XQ93008 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
USP9XQ93008 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC15.78■□□□□ 0.12
USP9XQ93008 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
USP9XQ93008 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.78■□□□□ 0.12
USP9XQ93008 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.78■□□□□ 0.12
USP9XQ93008 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
USP9XQ93008 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC15.78■□□□□ 0.12
USP9XQ93008 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
USP9XQ93008 OR8S1-201ENST00000310194 1080 ntBASIC15.78■□□□□ 0.12
USP9XQ93008 MIR661-201ENST00000384842 89 ntBASIC15.78■□□□□ 0.12
USP9XQ93008 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.78■□□□□ 0.12
USP9XQ93008 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.78■□□□□ 0.12
USP9XQ93008 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
USP9XQ93008 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC15.78■□□□□ 0.12
USP9XQ93008 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
USP9XQ93008 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
USP9XQ93008 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
USP9XQ93008 PWWP2AP1-201ENST00000429776 2273 ntBASIC15.78■□□□□ 0.12
USP9XQ93008 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.78■□□□□ 0.12
USP9XQ93008 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
USP9XQ93008 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
USP9XQ93008 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
USP9XQ93008 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.78■□□□□ 0.12
USP9XQ93008 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.78■□□□□ 0.12
USP9XQ93008 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.78■□□□□ 0.12
USP9XQ93008 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.78■□□□□ 0.12
USP9XQ93008 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
USP9XQ93008 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
USP9XQ93008 TCF3P1-201ENST00000423021 1937 ntBASIC15.77■□□□□ 0.12
USP9XQ93008 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
USP9XQ93008 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC15.77■□□□□ 0.12
USP9XQ93008 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
USP9XQ93008 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
USP9XQ93008 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
USP9XQ93008 PRYP5-201ENST00000451909 266 ntBASIC15.77■□□□□ 0.12
USP9XQ93008 BX005266.1-201ENST00000473402 457 ntBASIC15.77■□□□□ 0.12
USP9XQ93008 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
USP9XQ93008 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
USP9XQ93008 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
USP9XQ93008 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.77■□□□□ 0.11
USP9XQ93008 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.77■□□□□ 0.11
USP9XQ93008 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
USP9XQ93008 AL024508.2-201ENST00000607749 1894 ntBASIC15.77■□□□□ 0.11
USP9XQ93008 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
USP9XQ93008 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
USP9XQ93008 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
USP9XQ93008 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
USP9XQ93008 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
USP9XQ93008 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
USP9XQ93008 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
USP9XQ93008 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.11
USP9XQ93008 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.77■□□□□ 0.11
USP9XQ93008 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
USP9XQ93008 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.77■□□□□ 0.11
USP9XQ93008 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.77■□□□□ 0.11
USP9XQ93008 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.77■□□□□ 0.11
USP9XQ93008 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.77■□□□□ 0.11
USP9XQ93008 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
USP9XQ93008 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
USP9XQ93008 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
USP9XQ93008 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
USP9XQ93008 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
USP9XQ93008 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
USP9XQ93008 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
USP9XQ93008 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
USP9XQ93008 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.76■□□□□ 0.11
USP9XQ93008 MTCL1P1-201ENST00000446207 792 ntBASIC15.76■□□□□ 0.11
USP9XQ93008 ACTG1P14-201ENST00000446382 1122 ntBASIC15.76■□□□□ 0.11
USP9XQ93008 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.76■□□□□ 0.11
USP9XQ93008 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.76■□□□□ 0.11
USP9XQ93008 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.76■□□□□ 0.11
USP9XQ93008 AC022145.2-201ENST00000598203 171 ntBASIC15.76■□□□□ 0.11
USP9XQ93008 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.76■□□□□ 0.11
USP9XQ93008 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
USP9XQ93008 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
USP9XQ93008 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
USP9XQ93008 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
USP9XQ93008 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
USP9XQ93008 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
USP9XQ93008 LINC00602-201ENST00000629776 2065 ntBASIC15.76■□□□□ 0.11
USP9XQ93008 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
USP9XQ93008 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
USP9XQ93008 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC15.76■□□□□ 0.11
USP9XQ93008 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC15.76■□□□□ 0.11
USP9XQ93008 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC15.76■□□□□ 0.11
USP9XQ93008 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.76■□□□□ 0.11
USP9XQ93008 AC004449.1-201ENST00000564240 433 ntBASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms