Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C9orf40Q8IXQ3 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
C9orf40Q8IXQ3 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
C9orf40Q8IXQ3 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C9orf40Q8IXQ3 CHCHD2P8-201ENST00000429873 447 ntBASIC16.79■□□□□ 0.28
C9orf40Q8IXQ3 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.79■□□□□ 0.28
C9orf40Q8IXQ3 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.79■□□□□ 0.28
C9orf40Q8IXQ3 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
C9orf40Q8IXQ3 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.79■□□□□ 0.28
C9orf40Q8IXQ3 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.79■□□□□ 0.28
C9orf40Q8IXQ3 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
C9orf40Q8IXQ3 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C9orf40Q8IXQ3 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.79■□□□□ 0.28
C9orf40Q8IXQ3 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
C9orf40Q8IXQ3 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
C9orf40Q8IXQ3 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C9orf40Q8IXQ3 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.79■□□□□ 0.28
C9orf40Q8IXQ3 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
C9orf40Q8IXQ3 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C9orf40Q8IXQ3 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
C9orf40Q8IXQ3 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.79■□□□□ 0.28
C9orf40Q8IXQ3 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C9orf40Q8IXQ3 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
C9orf40Q8IXQ3 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C9orf40Q8IXQ3 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
C9orf40Q8IXQ3 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C9orf40Q8IXQ3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.78■□□□□ 0.28
C9orf40Q8IXQ3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C9orf40Q8IXQ3 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
C9orf40Q8IXQ3 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
C9orf40Q8IXQ3 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.78■□□□□ 0.28
C9orf40Q8IXQ3 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
C9orf40Q8IXQ3 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
C9orf40Q8IXQ3 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
C9orf40Q8IXQ3 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
C9orf40Q8IXQ3 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.78■□□□□ 0.28
C9orf40Q8IXQ3 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C9orf40Q8IXQ3 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C9orf40Q8IXQ3 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.78■□□□□ 0.28
C9orf40Q8IXQ3 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C9orf40Q8IXQ3 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.78■□□□□ 0.28
C9orf40Q8IXQ3 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.78■□□□□ 0.28
C9orf40Q8IXQ3 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.78■□□□□ 0.28
C9orf40Q8IXQ3 AP002383.4-201ENST00000442518 975 ntBASIC16.78■□□□□ 0.28
C9orf40Q8IXQ3 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.78■□□□□ 0.28
C9orf40Q8IXQ3 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.78■□□□□ 0.28
C9orf40Q8IXQ3 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.78■□□□□ 0.28
C9orf40Q8IXQ3 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
C9orf40Q8IXQ3 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.78■□□□□ 0.28
C9orf40Q8IXQ3 NPAP1P7-201ENST00000613027 823 ntBASIC16.78■□□□□ 0.28
C9orf40Q8IXQ3 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.78■□□□□ 0.28
C9orf40Q8IXQ3 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.78■□□□□ 0.28
C9orf40Q8IXQ3 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C9orf40Q8IXQ3 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.78■□□□□ 0.28
C9orf40Q8IXQ3 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
C9orf40Q8IXQ3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
C9orf40Q8IXQ3 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
C9orf40Q8IXQ3 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.78■□□□□ 0.28
C9orf40Q8IXQ3 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C9orf40Q8IXQ3 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
C9orf40Q8IXQ3 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
C9orf40Q8IXQ3 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.78■□□□□ 0.28
C9orf40Q8IXQ3 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
C9orf40Q8IXQ3 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
C9orf40Q8IXQ3 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C9orf40Q8IXQ3 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C9orf40Q8IXQ3 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.78■□□□□ 0.28
C9orf40Q8IXQ3 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
C9orf40Q8IXQ3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
C9orf40Q8IXQ3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
C9orf40Q8IXQ3 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
C9orf40Q8IXQ3 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.77■□□□□ 0.28
C9orf40Q8IXQ3 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
C9orf40Q8IXQ3 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
C9orf40Q8IXQ3 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.77■□□□□ 0.28
C9orf40Q8IXQ3 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
C9orf40Q8IXQ3 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.77■□□□□ 0.28
C9orf40Q8IXQ3 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
C9orf40Q8IXQ3 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
C9orf40Q8IXQ3 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.77■□□□□ 0.28
C9orf40Q8IXQ3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
C9orf40Q8IXQ3 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
C9orf40Q8IXQ3 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
C9orf40Q8IXQ3 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
C9orf40Q8IXQ3 BICD1-207ENST00000551848 1962 ntBASIC16.77■□□□□ 0.27
C9orf40Q8IXQ3 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
C9orf40Q8IXQ3 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
C9orf40Q8IXQ3 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
C9orf40Q8IXQ3 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.76■□□□□ 0.27
C9orf40Q8IXQ3 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.76■□□□□ 0.27
C9orf40Q8IXQ3 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
C9orf40Q8IXQ3 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
C9orf40Q8IXQ3 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
C9orf40Q8IXQ3 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
C9orf40Q8IXQ3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
C9orf40Q8IXQ3 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.76■□□□□ 0.27
C9orf40Q8IXQ3 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
C9orf40Q8IXQ3 TSPY12P-201ENST00000421279 868 ntBASIC16.76■□□□□ 0.27
C9orf40Q8IXQ3 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.76■□□□□ 0.27
C9orf40Q8IXQ3 ATP5G2P1-201ENST00000433580 426 ntBASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms