Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
ZNF546Q86UE3 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF546Q86UE3 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
ZNF546Q86UE3 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.17■□□□□ 0.02
ZNF546Q86UE3 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
ZNF546Q86UE3 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF546Q86UE3 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF546Q86UE3 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
ZNF546Q86UE3 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC15.17■□□□□ 0.02
ZNF546Q86UE3 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
ZNF546Q86UE3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC15.17■□□□□ 0.02
ZNF546Q86UE3 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF546Q86UE3 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF546Q86UE3 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF546Q86UE3 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
ZNF546Q86UE3 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.16■□□□□ 0.02
ZNF546Q86UE3 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC15.16■□□□□ 0.02
ZNF546Q86UE3 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF546Q86UE3 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF546Q86UE3 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF546Q86UE3 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF546Q86UE3 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF546Q86UE3 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC15.16■□□□□ 0.02
ZNF546Q86UE3 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF546Q86UE3 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF546Q86UE3 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF546Q86UE3 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF546Q86UE3 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF546Q86UE3 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF546Q86UE3 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
ZNF546Q86UE3 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC15.16■□□□□ 0.02
ZNF546Q86UE3 HSCB-202ENST00000398941 955 ntTSL 2 BASIC15.16■□□□□ 0.02
ZNF546Q86UE3 AC016769.1-201ENST00000409132 1010 ntBASIC15.16■□□□□ 0.02
ZNF546Q86UE3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF546Q86UE3 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC15.16■□□□□ 0.02
ZNF546Q86UE3 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC15.16■□□□□ 0.02
ZNF546Q86UE3 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC15.16■□□□□ 0.02
ZNF546Q86UE3 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF546Q86UE3 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
ZNF546Q86UE3 OR10C1-204ENST00000622521 1039 ntBASIC15.16■□□□□ 0.02
ZNF546Q86UE3 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.16■□□□□ 0.02
ZNF546Q86UE3 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF546Q86UE3 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF546Q86UE3 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
ZNF546Q86UE3 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF546Q86UE3 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
ZNF546Q86UE3 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF546Q86UE3 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF546Q86UE3 DOC2GP-204ENST00000639052 2548 ntBASIC15.16■□□□□ 0.02
ZNF546Q86UE3 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
ZNF546Q86UE3 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF546Q86UE3 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF546Q86UE3 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
ZNF546Q86UE3 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF546Q86UE3 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
ZNF546Q86UE3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.16■□□□□ 0.02
ZNF546Q86UE3 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF546Q86UE3 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
ZNF546Q86UE3 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF546Q86UE3 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC15.16■□□□□ 0.02
ZNF546Q86UE3 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
ZNF546Q86UE3 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF546Q86UE3 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF546Q86UE3 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF546Q86UE3 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF546Q86UE3 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF546Q86UE3 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.15■□□□□ 0.02
ZNF546Q86UE3 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF546Q86UE3 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF546Q86UE3 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.15■□□□□ 0.02
ZNF546Q86UE3 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF546Q86UE3 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
ZNF546Q86UE3 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.15■□□□□ 0.02
ZNF546Q86UE3 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF546Q86UE3 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC15.15■□□□□ 0.02
ZNF546Q86UE3 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF546Q86UE3 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF546Q86UE3 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF546Q86UE3 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF546Q86UE3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC15.15■□□□□ 0.02
ZNF546Q86UE3 DUX4L16-201ENST00000555130 1264 ntBASIC15.15■□□□□ 0.02
ZNF546Q86UE3 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.15■□□□□ 0.02
ZNF546Q86UE3 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
ZNF546Q86UE3 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
ZNF546Q86UE3 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
ZNF546Q86UE3 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC15.15■□□□□ 0.02
ZNF546Q86UE3 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.15■□□□□ 0.02
ZNF546Q86UE3 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF546Q86UE3 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF546Q86UE3 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.15■□□□□ 0.02
ZNF546Q86UE3 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF546Q86UE3 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
ZNF546Q86UE3 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF546Q86UE3 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF546Q86UE3 AL096828.2-201ENST00000567259 1965 ntBASIC15.15■□□□□ 0.02
ZNF546Q86UE3 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF546Q86UE3 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
ZNF546Q86UE3 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF546Q86UE3 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF546Q86UE3 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms