Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.8■□□□□ 0.28
ZNF550Q7Z398 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.8■□□□□ 0.28
ZNF550Q7Z398 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF550Q7Z398 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.8■□□□□ 0.28
ZNF550Q7Z398 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.8■□□□□ 0.28
ZNF550Q7Z398 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.8■□□□□ 0.28
ZNF550Q7Z398 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.8■□□□□ 0.28
ZNF550Q7Z398 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.8■□□□□ 0.28
ZNF550Q7Z398 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF550Q7Z398 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF550Q7Z398 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF550Q7Z398 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF550Q7Z398 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF550Q7Z398 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF550Q7Z398 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.8■□□□□ 0.28
ZNF550Q7Z398 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF550Q7Z398 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF550Q7Z398 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF550Q7Z398 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF550Q7Z398 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.79■□□□□ 0.28
ZNF550Q7Z398 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF550Q7Z398 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
ZNF550Q7Z398 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF550Q7Z398 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.79■□□□□ 0.28
ZNF550Q7Z398 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF550Q7Z398 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.79■□□□□ 0.28
ZNF550Q7Z398 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF550Q7Z398 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF550Q7Z398 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF550Q7Z398 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF550Q7Z398 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF550Q7Z398 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF550Q7Z398 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF550Q7Z398 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.79■□□□□ 0.28
ZNF550Q7Z398 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF550Q7Z398 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF550Q7Z398 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF550Q7Z398 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF550Q7Z398 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF550Q7Z398 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.79■□□□□ 0.28
ZNF550Q7Z398 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.79■□□□□ 0.28
ZNF550Q7Z398 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF550Q7Z398 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.79■□□□□ 0.28
ZNF550Q7Z398 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.79■□□□□ 0.28
ZNF550Q7Z398 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.79■□□□□ 0.28
ZNF550Q7Z398 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
ZNF550Q7Z398 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF550Q7Z398 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF550Q7Z398 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
ZNF550Q7Z398 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.79■□□□□ 0.28
ZNF550Q7Z398 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.79■□□□□ 0.28
ZNF550Q7Z398 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF550Q7Z398 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
ZNF550Q7Z398 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF550Q7Z398 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF550Q7Z398 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.79■□□□□ 0.28
ZNF550Q7Z398 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF550Q7Z398 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF550Q7Z398 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF550Q7Z398 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
ZNF550Q7Z398 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF550Q7Z398 AC138028.4-201ENST00000564984 1845 ntBASIC16.78■□□□□ 0.28
ZNF550Q7Z398 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF550Q7Z398 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.78■□□□□ 0.28
ZNF550Q7Z398 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF550Q7Z398 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF550Q7Z398 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF550Q7Z398 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.78■□□□□ 0.28
ZNF550Q7Z398 AP000523.1-201ENST00000398242 1049 ntBASIC16.78■□□□□ 0.28
ZNF550Q7Z398 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF550Q7Z398 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.78■□□□□ 0.28
ZNF550Q7Z398 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.78■□□□□ 0.28
ZNF550Q7Z398 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.78■□□□□ 0.28
ZNF550Q7Z398 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.78■□□□□ 0.28
ZNF550Q7Z398 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.78■□□□□ 0.28
ZNF550Q7Z398 NEK4P2-201ENST00000580004 1012 ntBASIC16.78■□□□□ 0.28
ZNF550Q7Z398 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.78■□□□□ 0.28
ZNF550Q7Z398 AC010240.3-201ENST00000607688 395 ntBASIC16.78■□□□□ 0.28
ZNF550Q7Z398 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.78■□□□□ 0.28
ZNF550Q7Z398 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF550Q7Z398 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.78■□□□□ 0.28
ZNF550Q7Z398 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF550Q7Z398 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF550Q7Z398 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF550Q7Z398 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.78■□□□□ 0.28
ZNF550Q7Z398 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
ZNF550Q7Z398 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF550Q7Z398 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF550Q7Z398 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
ZNF550Q7Z398 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.78■□□□□ 0.28
ZNF550Q7Z398 NOC2LP2-201ENST00000407594 1944 ntBASIC16.78■□□□□ 0.28
ZNF550Q7Z398 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF550Q7Z398 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF550Q7Z398 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.78■□□□□ 0.28
ZNF550Q7Z398 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF550Q7Z398 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.78■□□□□ 0.28
ZNF550Q7Z398 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF550Q7Z398 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.78■□□□□ 0.28
ZNF550Q7Z398 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
ZNF550Q7Z398 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms